Gene Sros_6778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6778 
Symbol 
ID8670087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7462523 
End bp7463812 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content74% 
IMG OID 
ProductMembrane-bound lytic murein transglycosylase B- like protein 
Protein accessionYP_003342230 
Protein GI271968034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG TGTCGCATCT TCCCCGGTTG TGGGCGTTCG TCACGATGAT CGCCATCGTG 
GCCGCGCTCG CGGTCGTCGT CGGCGCGGTG TTCCTCGCCA CCCGTCCCGC CGGCTCCCTC
ACGGCCACCG CCGCCGAGTC CGACCTCCCC GACCTGGCCG GACTCGCCCC GCTGGCCGGC
CCCCCGACGG CCGGGCCGAC CCCGGCGCCC TCCGCGGCCC CGGTGACCCC GGTGACCCCG
GTGACCCCGG CCACCGGCGG TCCCGGGATC ACCCTGACCC CGCCCCGGCT GCTGGTGATC
TCCCAGGCGA GCCTGCCCCA GCAGACCAAG GAGGACATCT CCCAGCTCAA GCACGTCGAG
AAGATCGACT CCTTCGACGG CGGGGCGGTC AGGATCTCCG GGGCCGGGCT CAACCTGCTC
GCGGTCGACC CGGCGCGGTT CCGCGCCTGG GCGCCGAAGG CCGTGGCCGA GCAGCCCAGG
GTGTGGAGCG CGCTGACCCA GGGGGAGTTC GTCGCCGACA GCTCGGCGGT GCGCCGCTTC
GGGCTGGTCC TCGGATCGGA GTACCAGGTG GACGGCGGCC CCCGGCTCCG GGTCGCGGCG
TCCGCCTCGT TCGGCCTGCC CGGCGTGGAC GGCCTGGTCG GCATGGAGAC CGGCCGGCGG
CTCGGGCTGC TGCCGGGCGT GGCACTGCTG GTGCACGGCC CGGAGAAGGC GGCGACCGCC
CTGAACGCCG GGGTACGCAG GCTGCTCGGC TCGGGCGCGC AGGTGGTCAC GGTGGGCGGC
GGCCGTACGG CGCGGGCCGC CGCGGACAAG AGCGCCGCGG ACAGGCCCGC CACAGGCAAG
ACCACCGCCA AGACCACGGG CAAGACCACC GCCAAGCAGC CGCGGGCGCC CCGGCAGGTG
GCGGTCGGAC GGCCCGGCAG CTACCTGGAT CTGTACCGCA GGTCGGCCGC CGTCTGCCCG
GGCCTGTCAT GGACGGTGCT GGCCGCGATC GGCCAGGTGG AGAGCTCGCA CGGGCGCAAC
AACGGGCCGT CCTCGGCGGG CGCGCAGGGC CCCATGCAGT TCATGCCCGC CACCTGGAAG
GCCTACGGCG TCGACGGCGA CGGCGACGGC GTCGCCGACA TCTGGAGCCC CTACGACGCC
GTCCCCTCGG CGGCCAACTA CCTGTGCGCC AACGGCGCCG GGCAGGGCGG CAAGAAGCTG
GAGAAGGCCA TCTGGTTCTA CAACCACTCC TGGTCGTATG TCAGCAAGGT CATGTCCATC
TCCCTGGGCT ACGCCCGCGC CTACCCGTGA
 
Protein sequence
MSAVSHLPRL WAFVTMIAIV AALAVVVGAV FLATRPAGSL TATAAESDLP DLAGLAPLAG 
PPTAGPTPAP SAAPVTPVTP VTPATGGPGI TLTPPRLLVI SQASLPQQTK EDISQLKHVE
KIDSFDGGAV RISGAGLNLL AVDPARFRAW APKAVAEQPR VWSALTQGEF VADSSAVRRF
GLVLGSEYQV DGGPRLRVAA SASFGLPGVD GLVGMETGRR LGLLPGVALL VHGPEKAATA
LNAGVRRLLG SGAQVVTVGG GRTARAAADK SAADRPATGK TTAKTTGKTT AKQPRAPRQV
AVGRPGSYLD LYRRSAAVCP GLSWTVLAAI GQVESSHGRN NGPSSAGAQG PMQFMPATWK
AYGVDGDGDG VADIWSPYDA VPSAANYLCA NGAGQGGKKL EKAIWFYNHS WSYVSKVMSI
SLGYARAYP