Gene Sros_6766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6766 
Symbol 
ID8670075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7448593 
End bp7449891 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content71% 
IMG OID 
Productpermease-like protein 
Protein accessionYP_003342218 
Protein GI271968022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0612117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCG ATCGGGAACG TCTGACGCAG TTGGTGCCGC GCACGCTGCT CCGCCTGGCC 
GCATGGAGCC TGTGCCTGAT CATCATCGGC TGGGCCGTGT TCTACTTCGC GCAGTTCATC
GCGATGCTGC GCATCGTGAT CCTGCCCGTG GCCGTCGCGC TGTTGCTCAC CGCGCTGCTG
TTCCCGGTCA CCCGCAGGCT CCGGGCGATG GGCATGCGGC CGATCTACGC CACATGGGTC
ACCCTGCTCA TCGCGCTCGC GGTGCTGGGC GGCATCGGCT GGTTCATCGG GGTGCGGGCC
AACGACGAGT TCCCCGGACT GGTCGACCAG GTCCGGGCGA CCTCCAAGAC CGTGGAGGAC
TGGCTCTACA CCGGGCCGCT GCACCTGCAG CCCAGCCAGC TCAGCAAGTG GATCGACGAG
ATCGCCGTCC AGGTCACCAC GCAGCGCAAC CAGATCACCC AGACGGTGCT CACCGGCGCC
ACCGTGGCGC TGGAGGTGCT GGCCTCCATC GTGCTGCTGC TGTTCGTCAC GTTCTTCCTG
CTCAAGGACG GCGACCGGAT CTGGGCGTGG TTCCTGCGGG CCTTCGGGGG GACCGCGCCC
CGCGTGGACC GGGCCGGGCG GGCCGCCTGG GTGACGCTCT CGCACTACGT CCAGGGCACG
GTGGCGGTGG CCGGCGTGCA CGGTGTGATC ATGGGCATCG TCCTCGCCGG GATGGGCGTG
CCGCTCTGGG CGCCGCTGGC GGTGCTGATC TTCCTGGCCA GCTTCATCCC CATCGTCGGC
ATCTTCTTCG CCGGCGCGGT CGCGACCCTG GTCACCCTCG GCGCCAAGGG CCCGATCTAC
GCCCTGATCT TCCTCGGCAT CCTGGTGGTG GAGCAGCAGC TGGAGAACCA CGTGCTCCAG
CCGCTGATCG TCGGCCGGGC GCTGAGCTTC CACCCGCTGG CCATCATCCT GGTGCTGGCC
GTGGGCGGCA TCCTGGCGGG CATCGCCGGG GCCGCGGTGG CGGTGCCGGT CGCCGCCGTG
ATCTACCGGG CTCTGCCCGA GCTCAGCAGC GATCCTCCGA GGGCGCTGCC CGCCGTACCC
GAGCCGGACG AGCCGGACGA GCCGCCCGAG CCGGGTGAGC CGGGTGAGCC GGGTGAGGCG
CCCGAGCCGG GTGAGCCGGG CGAGTCGTCG GAGGCGGGCG AGTCGCTTGA TCCGGGTGAG
CCGCCGGGGT GGGACGAGTC GCCGGGACCG GCCCGGCCGG CCGGGGCCGC CGAGCCCTTC
GCGCCCGTGA ATGAGGGATC ACCGCAGCCC AAGGGGTAA
 
Protein sequence
MISDRERLTQ LVPRTLLRLA AWSLCLIIIG WAVFYFAQFI AMLRIVILPV AVALLLTALL 
FPVTRRLRAM GMRPIYATWV TLLIALAVLG GIGWFIGVRA NDEFPGLVDQ VRATSKTVED
WLYTGPLHLQ PSQLSKWIDE IAVQVTTQRN QITQTVLTGA TVALEVLASI VLLLFVTFFL
LKDGDRIWAW FLRAFGGTAP RVDRAGRAAW VTLSHYVQGT VAVAGVHGVI MGIVLAGMGV
PLWAPLAVLI FLASFIPIVG IFFAGAVATL VTLGAKGPIY ALIFLGILVV EQQLENHVLQ
PLIVGRALSF HPLAIILVLA VGGILAGIAG AAVAVPVAAV IYRALPELSS DPPRALPAVP
EPDEPDEPPE PGEPGEPGEA PEPGEPGESS EAGESLDPGE PPGWDESPGP ARPAGAAEPF
APVNEGSPQP KG