Gene Sros_6622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6622 
Symbol 
ID8669931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7289024 
End bp7289671 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003342077 
Protein GI271967881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.886769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGG ACCACGACGA GGTGTTCGGA GGCTCCCTGC CGTTCGGGGA GCGTCCCGCG 
CTGATCCTCA TCGACCTGAT GCGCGCCTAC TTCGAGCCCG GCGGCGAGCT GTTCCTGGGC
TCCCGCGACT GCCTGGAGTC GGCCGCCCGG GTTCTGGCCG CCGCCCGTAC GGCGGGCGTC
CCGGTGATCC ACACGAGGGT CGCGTTCGGC CCCGGCGGCG TGGACGGCGG GCTGTTCTTC
CGCAAGGTCG CCCCGCTGCG CCACCTCGTC GGCGACGGGC CGCTCGGCCG GCTGATGCCC
GAGGTGGCTC CCGGGCCCGA GGAGGTGGTG ATCGTCAAGC AGTACGCCAG CGCCTTCTTC
GGCACCACGC TCGCCTCGAC GCTCAACGCG CTGCGGGCCG ACACCCTCGT CATCACGGGC
GTGTCCACCA GCGGCTGCGT GCGCGCCAGC GCCGTCGACG CGGTGCAGCA CGGCTTCGTG
CCGGTCGTGG TGCGGCAGGC GGTCGGCGAC CGCGACCCCC GGCCGCACGA GGCCGCCCTG
TTCGACATCC AGGCCAAGTA CGGCGAGGTG TGGGACGAGG CGGCCGTGAC GGACCGGCTC
GGCGGGGGCC GCCGCCTGCG GGCCGGGAAC GGACCGCCGG CCGCATGA
 
Protein sequence
MIRDHDEVFG GSLPFGERPA LILIDLMRAY FEPGGELFLG SRDCLESAAR VLAAARTAGV 
PVIHTRVAFG PGGVDGGLFF RKVAPLRHLV GDGPLGRLMP EVAPGPEEVV IVKQYASAFF
GTTLASTLNA LRADTLVITG VSTSGCVRAS AVDAVQHGFV PVVVRQAVGD RDPRPHEAAL
FDIQAKYGEV WDEAAVTDRL GGGRRLRAGN GPPAA