Gene Sros_6613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6613 
Symbol 
ID8669922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7279999 
End bp7280763 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content74% 
IMG OID 
ProductNYC1; chlorophyll b reductase 
Protein accessionYP_003342068 
Protein GI271967872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0625441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTAG TCGTCACCGG CGGCACCCGC GGCCTCGGCC TCGGCCTGGT CCGGGAGTTC 
CTCGACCGGG GCCACCAGGT CGCCTTCTGC GGCAGCCGCC CCGAATCCGT CGACGGGGCG
CTGGCCACGC TGGAGGCCGG GCGGGTGTGC GGGGTGGTCG CCGACGTCAC CGACCGGGCC
CAGGTCCAGG CGCTCTGGGA CGCCGCCGTG GACCGCTTCG GGAAGGTCGA CGTCTGGATC
AACAACGCCG GGGTCTCCCA CTCGCGCAAG CCGCTGTGGG AGCTCCCGGC CGCCGAGGCC
GCGACGGTCG TCGGCGTCAA CCTCACCGGC GTGCTCAACG GCAGCGCGGT CGCCCTGGCC
GGGATGGCCG AGCAGGGCCA CGGCCACGTC TGGAACATGG AGGGGCTCGG CAGCGACGGC
CGCGCCGTAC CCGGGCTGTC CGTCTACGGC GCGACCAAGC GGGCGCTCAC CTACCTCACC
CGCGCCCTGG CCAAGGAGGT CCCCGACGGC GTCTCCGTGG GCCTGCTGAG CCCCGGCATG
GTGGTCACCG ACCTGCTGGT CCACGACTAC TCGCCGGAGG AGCTGGCCCG AGCCGCCCGG
ATCTTCAACA TCCTGGCCGA CCGCGTCGGG ACCGTCGCCC CCTGGCTGGC CGGACGAGCG
CTGTCGCAGA CCCGCAACGG CGCCCACGTC CGCTGGCTGA CCAGGCGCAA GGTGTTCGCC
CGCTTCGCCG CCGCCCCCTT CGGGAAGCGC CGGGTGATCC CGTGA
 
Protein sequence
MVVVVTGGTR GLGLGLVREF LDRGHQVAFC GSRPESVDGA LATLEAGRVC GVVADVTDRA 
QVQALWDAAV DRFGKVDVWI NNAGVSHSRK PLWELPAAEA ATVVGVNLTG VLNGSAVALA
GMAEQGHGHV WNMEGLGSDG RAVPGLSVYG ATKRALTYLT RALAKEVPDG VSVGLLSPGM
VVTDLLVHDY SPEELARAAR IFNILADRVG TVAPWLAGRA LSQTRNGAHV RWLTRRKVFA
RFAAAPFGKR RVIP