| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6559 |
|---|
| Symbol | |
|---|
| ID | 8669868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7219109 |
|---|
| End bp | 7221547 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | drug exporter of the RND superfamily-like protein |
|---|
| Protein accession | YP_003342015 |
|---|
| Protein GI | 271967819 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00116362 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC TGCTGTGCGG CCGGCGCACG AAATGGGTGG TGCTGGTCAT CTGGCTGGGC
ATCATCGGGA CGGCCGCCTC CTTCGCCGGG CGGCTGGAGT CGGTGCAGAA GGACGACATC
GCCGCCTACC TCCCCGAGAA CGCCGACTCC GCGCGGGCGG TCAAGCGCAT CCTCGGCATG
CAGGGGGAGA ACCTCTCCCC GGCGACGATC GTCTACGAGC GGCGTGAGGG CGTCACCACG
GCCGACCGGG ACGAGATCGC CCGGGACATG AAGGAGTTCG CCGGGATCGA CGGGGTGGTG
GCGGAGCTGC CCACGCCGAC CGGGGGCAAG ACCTTCGGGC GGGCGGAGTT CGACAGGGAG
CTCAAGCCGT ACCGGGACGC CAGGGGGAGG CTGCCCGAGC AGCTGCAGGT GGTCGAGCGG
AAGCTCCAGA TGCCCAGGCT GACCAAGACG ATCAAGCTGA TCGCCGCGCA GCGGTCCAAG
GACGGCCAGG CCGTCCAGGT CGTGGTCATC GTCAGGGACC GGGGCGGCCG GGAGACGGCC
GAGGTCGTCG AGCGGGTGCG CCGGGTCGTC GACGCGGGCC GCCCCGCCGG GCTGGCCGCG
CACATCACGG GCATGGTCGG GTTCCAGGCC GACGCGCTCG CGGTGTTCTC GACCGTGGAC
ACCAACCTGC TGCTGGCCGC GATGGGCGTG GCGGTGGTGG TGCTGCTGAT CACCTATCGC
AGCGTGCTCC TCTGGCTGTT CCCGCTGAGC GTCGTGCTGG TGGGACTGGT CGTCGCGATG
GGGGTCAACT ACCTGCTCGC CGCCGCCGAG GTGATCACGG TCAGCAGCGT GGCGGTCTCG
CTGCTCATGG TCCTGGTGAT CGGCGCGGGG ACCGACTACG CGCTGCTGCT CATCGCCCGC
TACCGGGAGG AGTTGGGCAG GCACGAGGAC CGGCACGAGG CGATGGCGGT GGCGCTGCGC
CGGGCCGGGC CGGCGGTGCT GGCGAGCGCG GCGACCGTGG TGGCCGGGCT GCTCTGCCTG
CTGGTGGCCG ACCTCAACTC CACCAAGGGG CTCGGGCCGG TCTCGGCGGT CGGCGTGGCC
GGCGTGATGC TCGCCATGAT GACGCTGCTG CCCGCCGTGA TGGTCGTCTT CGGGCGGTGG
GTGTTCTGGC CGCTCATCCC GCGCTGCCGG TCCTCGGAGC GGCCGGACCA CGCGCCGGGG
GGCGGAAGGG AGGCCGGGGC GGGCCGGTCC GGCGGGCGTG GCCCGGTGCG GCCGTCCGGT
GCGGCCGGGG AGCCGCCTGC CGACGCCGGA ATCTGGGGAG CTTTAGGCCG AAAAATCGCG
AAAAATCCTC GGCTGGTGTG GGTGGTCACC GTCATCGGGC TGGGCGTATG CGCGTCCGGG
CTGGCCTCCT ACAAGGCGGG CGGGCTGGGC AACGCCGACG TGTTCCTCGG CCGGCCGGAC
TCGGTCGTCG GGCAGGAGGC CGCCGCGAGG CACTTCCCGT CCGGCGCGGC CGACCCGGTC
CAGGTGGTCA CCACCGAGCA GTACGTCAGG GACGTGATCG TGGACACCGC CCAGCGGCCC
GAGGTCACCG CGATCTCGCT GGGCGCGGCC GGGAACGGCG ACATCCTGCT CAACGTGAGC
GTGCGCGCCG GCGACGGCGA GGAGTCCGAG CAGCAGGAGG TGCTCGCCCT GCGCGACCGG
CTGCGGGCGG TGGCCGCCCC GGACGTCAAC GTCGGCGGGA ACGTGGCGCT CGTCGCCGAT
CTGGAGCGGG GCGCGCAGCG GGACCGCGCA CTGATCATCC CGCTGGTGCT GCTGGTGGTC
TTCGCGGTGC TGGCCCTGCT GCTGCGCTCG CTCGTCGCGC CGCTGCTGCT GCTGGCGACC
GTCGTGGTGT CGTTCCTGGC GACGCTGGGG ATCAGCTCGC TGGCCTTCAC CCACCTGTTC
GGCTTCGCCG GGGTCGACCA GGGGTTCGTC CTGCTGGTCT TCGTGTTCCT GGTGGCGCTC
GGGGTGGACT ACAACATCTT CCTGATGCAC CGGGTGCGGG AGGAGGCGCA CCGGCACAGC
ACCGCGCACA GCGCGATCCT CGGCCTCGGC GCGACCGGCG GCGTGATCAC CTCGGCCGGG
GTCGTGCTCG CGGGCACCTT CGCGGTGCTC GTGGTGCTGC CGCTGACGCA GACCGTGCAG
ATCGCCTTCG CGGTGGCGGT GGGCGTGCTG CTCGACACGA TGATCGTCCG CTCGGTGCTC
GTCACCGCGC TGACCCTGGA CGTCGGCGAC GCCGTCTGGT GGCCGAGCCG GCTGGCGAGA
GGGCTGTCCT GGTGGCACCG CGCGGGGCGG CCGGTCCGGC GGCCGGACCC CCGGGTGCGG
CCCCAGGTCC TGCTCCGGCC CCGTGGACTG GTACGGCCGC GCGTCATGCT CAGATCCAGC
CGGGTCGTCT TGATGAAAGG CGAAAAAATG GGCGGTTAG
|
|---|
| Protein sequence | MTALLCGRRT KWVVLVIWLG IIGTAASFAG RLESVQKDDI AAYLPENADS ARAVKRILGM
QGENLSPATI VYERREGVTT ADRDEIARDM KEFAGIDGVV AELPTPTGGK TFGRAEFDRE
LKPYRDARGR LPEQLQVVER KLQMPRLTKT IKLIAAQRSK DGQAVQVVVI VRDRGGRETA
EVVERVRRVV DAGRPAGLAA HITGMVGFQA DALAVFSTVD TNLLLAAMGV AVVVLLITYR
SVLLWLFPLS VVLVGLVVAM GVNYLLAAAE VITVSSVAVS LLMVLVIGAG TDYALLLIAR
YREELGRHED RHEAMAVALR RAGPAVLASA ATVVAGLLCL LVADLNSTKG LGPVSAVGVA
GVMLAMMTLL PAVMVVFGRW VFWPLIPRCR SSERPDHAPG GGREAGAGRS GGRGPVRPSG
AAGEPPADAG IWGALGRKIA KNPRLVWVVT VIGLGVCASG LASYKAGGLG NADVFLGRPD
SVVGQEAAAR HFPSGAADPV QVVTTEQYVR DVIVDTAQRP EVTAISLGAA GNGDILLNVS
VRAGDGEESE QQEVLALRDR LRAVAAPDVN VGGNVALVAD LERGAQRDRA LIIPLVLLVV
FAVLALLLRS LVAPLLLLAT VVVSFLATLG ISSLAFTHLF GFAGVDQGFV LLVFVFLVAL
GVDYNIFLMH RVREEAHRHS TAHSAILGLG ATGGVITSAG VVLAGTFAVL VVLPLTQTVQ
IAFAVAVGVL LDTMIVRSVL VTALTLDVGD AVWWPSRLAR GLSWWHRAGR PVRRPDPRVR
PQVLLRPRGL VRPRVMLRSS RVVLMKGEKM GG
|
|---|
| |