| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6553 |
|---|
| Symbol | |
|---|
| ID | 8669862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7193016 |
|---|
| End bp | 7194587 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003342009 |
|---|
| Protein GI | 271967813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0933727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000508986 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGA CATTCCACCG CACTCTCATC GCTCTCGCCT TACTCCTCAT CGCCCAGCTC
GGCGTGGTGG CACCCACCAC GGCCCAGGCC GCGCTGCCGT ACCCCACCCG CTCCGACTAC
CGCATCAAGG GTCTGCAACC CGACTTCTGG CCGGAGAAGA ACGACATCTC CGGCAACAAC
GCGGGCGGCG TGGCCATGAA CCTCATCTGG TCGGACTGGG AGCCCAGCGT CAAGGCGCCG
CCGTGCGCGA CGGGCGCGCA GGAGTTCGGC GGGCGCTGCT TCACCGTCAA CTCACGCGTC
GACGCCGACA TCAAGGCCTG GACCGACCGC GGGCTCGTCG TCACCGCGGT CGTGTACGGC
ACGCCCGCCT GGGCCCGGCA GGGCAGGACG TGCACGCCCG CCGCCGCCGG CTTCGAGATG
TTCTGTGTCC CGAACAACCC GGCCGACTAC GGCCGCTTCG CGGGAATGCT CGCCCAGCGC
TACGACGGCC AGCACGGCCA CGGCCGCATC GCCGACTTCG TCGTCATGAA CGAGGTCAAC
AGCAACACGT GGTTCGACAT CGGCTGCGGC CAGGGGACGG CGTGCAACCA GACCGCCTGG
CTGGACGCGA TCGCCGCGAA CTACAACGCC GCCTACGACG CGATCACCGC CCAGCAGCCG
ACGGCCAAGG TGCTCACCTC GCTCGACCAC TATTTCGGCA CCACCTACGA CCGGCCGGCG
GCGGCCGAGG CGATGCTGTC GGGCATGACC GTGCTCAAGG GGCTGGCCGC GCGGGCGGGC
GGCCGTGCAT GGCGGGTGGC CTACCATCCG TACCCGCCCA ACCTGCTGCG CCCCGAGTTC
TCCGCCGACG ACTTCCCCAA GGTGACCTAC GGCAACATCG GCGTCCTGGT GGGATGGTTG
CGGCAGCAGT TCCCCGGCAC CCCGTCGGCG TGGGAGGTGC AGCTGACCGA GAGCGGCGTC
AACTCCCTGG CGCCGTCGAG CGAGTCGGCC CAGGCGGCCA GGTTGTGCGA CTCCTTCCGC
AACGTGCTCG GCACGCCCGG CATCGAGAGC TACATCTGGC ACCGGATGAG CGACCATCCC
GACGAGACCG CCGCCGGGCT CGGCGTGGGC CTGCACCGCA CCAACGGCAC GGCCAAGCCG
GCGTGGGCCA CCTGGGCCCT GGCCAACCGC GCCGACCTCT CGCCGCCCCA GCTGTCCTGC
GGTTTCGAGC AGCTGCCCTA CACCCGGCTC CGCCGGGGGT TCAGCACCGC CCGCGGCCAT
CTGGCGTCCT CACGGCTGCT GCCGCCGGGC GTCACCCAGG AGCAGAGCTG GCGGCTGCTG
CGCAGGCCGG CGTCCGGGAC CGTGGCCCTG TACGAGTGCA AGGTCGGTGA CCACACCCTC
CTCACCACCG ACGGCGGCTG CGAGGGGCAG TTCCCCATGG GGCCGGTCGG CTACGCCTAC
ACCACGCAGG TGAGCGGCTC GGTGCCGCTC TACCGCTGTC GCAACACGGC CAACGGTGAC
CATCTCATCA CCAACCAGGC CGGCTGCGAG GGGTGGACCT ACGAGTCGCG GCTCGGTTAC
GTGCTGCCCT GA
|
|---|
| Protein sequence | MARTFHRTLI ALALLLIAQL GVVAPTTAQA ALPYPTRSDY RIKGLQPDFW PEKNDISGNN
AGGVAMNLIW SDWEPSVKAP PCATGAQEFG GRCFTVNSRV DADIKAWTDR GLVVTAVVYG
TPAWARQGRT CTPAAAGFEM FCVPNNPADY GRFAGMLAQR YDGQHGHGRI ADFVVMNEVN
SNTWFDIGCG QGTACNQTAW LDAIAANYNA AYDAITAQQP TAKVLTSLDH YFGTTYDRPA
AAEAMLSGMT VLKGLAARAG GRAWRVAYHP YPPNLLRPEF SADDFPKVTY GNIGVLVGWL
RQQFPGTPSA WEVQLTESGV NSLAPSSESA QAARLCDSFR NVLGTPGIES YIWHRMSDHP
DETAAGLGVG LHRTNGTAKP AWATWALANR ADLSPPQLSC GFEQLPYTRL RRGFSTARGH
LASSRLLPPG VTQEQSWRLL RRPASGTVAL YECKVGDHTL LTTDGGCEGQ FPMGPVGYAY
TTQVSGSVPL YRCRNTANGD HLITNQAGCE GWTYESRLGY VLP
|
|---|
| |