Gene Sros_6501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6501 
Symbol 
ID8669810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7134555 
End bp7135901 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content68% 
IMG OID 
ProductMembrane protein involved in the export of O- antigen and teichoic acid-like protein 
Protein accessionYP_003341958 
Protein GI271967762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGC CGGAAGTAGC GACCCCTCTC CGCAGGACCG TGCAGACGAT GGCGAGCAAC 
ACGCTCCGGC TCGTGCTGGC GACGGGTACG GGCGTCCTCA TCGCACGGGC CTTGCAGCCG
GAGAGCCGGG GCGTCTACGC CGTCGTCACC ACCGCGGCCC TGATCGCGAT GACCCTGGGG
CAGCTCTCCC TCGACAGGTC ACAGATCGCC CTGTGGCCGG ATGCCTCCCA GCGTCGTTTC
CTGATGGGCA ACGGCCTGCT TCTCGGGCTG CTCCTGGGAG TCGTGTCCGC CTCGGCCACC
TTCGCGGTCA CAGCGCTGTT CGTTCCTCAG GCGACGCCTT ACCTGCTGGT CATCGCCATG
CTCACGGTGC CTTTCGGCAT CTCGTGGACC AACCTTCAGG GGATCTTGCT TCTTCAGTCC
CGCACACGTC TGGTCAACGG AGCCTGGGTC CTGACCGGGC TGGTCCAGTT CCTGCCGATA
CTGGGCTTCG CCGTAGCCGG CTCCCTCACC GTCACCTCTG TGATCGTCTG CTGGGCGGCC
TCCACCGTGG CGCCCTTCAT CCTCTTCCTC TACGTGCTGC GCCGCTCGGC CCTGGGCGGA
GACGCCGCGC TCGCCCGGCG GCAACTCGCC CTGTCGGGCC GGTACCACAT CGGCCGGGTG
GCCTTCTACC TCCACATGAC CGCAGACGTC CTGCTGCTGA ATACCCTCGC CTCGCCGTCC
GAGGTCGGCC TGTACACCGT GGCGGTGTCG ATCCTGTCTC TCGCGCAGGT GCCGACCGAG
GCGGTGCGGC AGGTCTGCCT TCCGGGTCAG GTCGTGGAGA ACGACCGCGA CGCCGGTGAC
ACCACCGCCC GCGCCCTCCG GTTCAACCTG ATGTTCTCAG CGATTGTGAT CATCGCTCTG
GTGGTCACCG CTCCAGTACT GGTCCCGCTG GTCTACGGTT CCGCCTACGC CGGCAGTGTG
GCGCCGCTGT TCGCCCTGGC GGCCGGCGCG CTCGCCCTGG CCCCGCTCCG CGTGGTCGAG
CAGTACCTGA TCCGCCTGGG GCGCCCCATG ACCATGACCG CCATCGCGAT CGCCGGCCTC
GCCGTGAACC TCGGGTTGAA CGCGGTGCTC ATCCCCCTGT GGGGAGCCGT CGGAGCAGGG
CTGGCCTCAA CGGCGTCCTA TACGGTGATG GTCGCGATCG AAATCACTTG GTTCATCCGC
GTCTCCAAAG TCGGTGCACG GGGAGTGCTT CCCCAGATAT CCGATCTACG TCCTGTCCTC
TCGGGACTCG CCCGGATGCG CAGGGGCACG TCCAAGGGGC CGGCGGAGTC GCATGATCAT
GCCGGGGACG GCCGCCTGAG CGTATGA
 
Protein sequence
MPSPEVATPL RRTVQTMASN TLRLVLATGT GVLIARALQP ESRGVYAVVT TAALIAMTLG 
QLSLDRSQIA LWPDASQRRF LMGNGLLLGL LLGVVSASAT FAVTALFVPQ ATPYLLVIAM
LTVPFGISWT NLQGILLLQS RTRLVNGAWV LTGLVQFLPI LGFAVAGSLT VTSVIVCWAA
STVAPFILFL YVLRRSALGG DAALARRQLA LSGRYHIGRV AFYLHMTADV LLLNTLASPS
EVGLYTVAVS ILSLAQVPTE AVRQVCLPGQ VVENDRDAGD TTARALRFNL MFSAIVIIAL
VVTAPVLVPL VYGSAYAGSV APLFALAAGA LALAPLRVVE QYLIRLGRPM TMTAIAIAGL
AVNLGLNAVL IPLWGAVGAG LASTASYTVM VAIEITWFIR VSKVGARGVL PQISDLRPVL
SGLARMRRGT SKGPAESHDH AGDGRLSV