| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6400 |
|---|
| Symbol | |
|---|
| ID | 8669709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7005987 |
|---|
| End bp | 7007405 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003341857 |
|---|
| Protein GI | 271967661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.798401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0364521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCC TCCCGTTCAC CGGCTCCTCC GGACACCTCA CCGACAGGCA TGCCCCGGGC
GGAGGCGGAC CGGCCCGCCG CGGGCAGGGC GCGGACTCCT TCGCCGGCGC CGCCTCTGAG
CCCGCCACCC GGCCCGCCGG CGACGCCCGG GACGCCGCCC CCCGGCCCGC CGACGACGAC
CCAGGCATCG CTCCCCGGCC CTCCGGCGAC ATCTTGGGCG TCGTTCCCCG GCCTCCCGGC
GACGGCCCAG GCGTCGTTCC CCGGCCCGGC CCGGTACGGC GGGCGGCGGC GGAGCTCGGC
ACCCTCGCAC CCGGCCTGGG CGTGGCGGCC GCGGTGGTGG TCCTGTCGAC GGCACTGAGC
CGGGCCGTCC CCGGGACGAG CGCGGCCGTC ATCGCGGTGG CCTGCGGGGT CGCGCTCACC
AACCTCGGTG GATTCCACCG GTCGCTCCGC CCAGGGCTGC GGTTCGCGGG CCGCCGGCTG
CTCCGCCTGG CGATCGTGCT GCTCGGGCTG CAGATCGCCC TGCCGGAGGT GCTCGCACTC
GGCTGGCGGG CGCTCATGGT GATCGCCGCC GCCACCGGCG GCACGTTCCT CGCCACGCGG
TGGATCGGGA AGCGGATGGG GGTGAGCCCG CGCAGGTCGC TGCTCATCGC GACCGGGGTC
TCCGTGTGCG GGGCCGCGGC CGTGGCCGCC ATGCACGAGG TGGCCGACAG CGACGACGAC
GACGTGGCGA GCGCGGTCAG CGTGGTCGTC CTGTACGGCA GCGCCACGAT CGTCGTGCTG
CCGCTGCTCG CACGGTTCTT CGGCCTGACG CCGCACCAGT TCGGCGTGTG GGCGGGCGCT
TCGGTCCACG AGGTCGCCCA GGTGGCGGCC ATCGGCGCGA CCGCCGGGGC GGGGGTGCTG
GCGAGCGCGG TGGTGGCCAA GCTGGCCCGG GTCGTCCTGC TGGCCCCGAT CGTGGCACTG
ACCTCCGCCA CCCTGCGGCG CGGCGCGGCG CCCCGCCCGC CCGGGGCTCC CGGGACCGGG
GTGCCGGAAG GCGGCGGCGC GGACACGGCA GACACGGCGG ATATGACGGA TACCGGCACG
TCGGGCACGG CGGGCGACAA GGGCACGGCG GGGGGCGTGG CGGAGGGCGG GGCGGGCTCT
ACGGTCGCGG GTGCCGGGCG GCGTCCGCCG GTGATGCCCC TGTTCGTGGC GGGATTCCTC
ACAATGGTGA TCGCGCGGAG CACGGGCCTG GTCCCCGCCG AGGTCACCCG GGCGCTGCCC
GAGGTGACAG GAGTGTTACT CGCGGCCGCA CTCTTCGGGC TGGGGACAGG CGTCAACCTC
AGGGAGCTGG CGCGCGGCGG ACGGTCCCTG CTGCTGGGCG GAGCGGCCAC GGCGGTCATC
GGCGTGATCT CACTGCTCGG CGTGGTCATC ATGGGCTGA
|
|---|
| Protein sequence | MAFLPFTGSS GHLTDRHAPG GGGPARRGQG ADSFAGAASE PATRPAGDAR DAAPRPADDD
PGIAPRPSGD ILGVVPRPPG DGPGVVPRPG PVRRAAAELG TLAPGLGVAA AVVVLSTALS
RAVPGTSAAV IAVACGVALT NLGGFHRSLR PGLRFAGRRL LRLAIVLLGL QIALPEVLAL
GWRALMVIAA ATGGTFLATR WIGKRMGVSP RRSLLIATGV SVCGAAAVAA MHEVADSDDD
DVASAVSVVV LYGSATIVVL PLLARFFGLT PHQFGVWAGA SVHEVAQVAA IGATAGAGVL
ASAVVAKLAR VVLLAPIVAL TSATLRRGAA PRPPGAPGTG VPEGGGADTA DTADMTDTGT
SGTAGDKGTA GGVAEGGAGS TVAGAGRRPP VMPLFVAGFL TMVIARSTGL VPAEVTRALP
EVTGVLLAAA LFGLGTGVNL RELARGGRSL LLGGAATAVI GVISLLGVVI MG
|
|---|
| |