Gene Sros_6389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6389 
Symbol 
ID8669698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6993546 
End bp6994340 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341847 
Protein GI271967651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.940328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.338127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG CCGACTTCAC CCCCCTCCGC GTCACCTACC GCGAGGGGCT CTCCCGTGAC 
ACCTCCCTCC GCATGCGCGC ATGGGCGAAG GCGAAGGGCT ACTCCGTCAG CGAGCGTGGC
CGGGTCGCGC CGGAGATCAT CGATGCCTTC CTCGCCGCCC ATCCCGAGGT CTACGAGCAG
GCAAGAAAGT TCGAGATGGT CCACGCCACC GCGAGAACCC CCGGCGCGTC GCCGGAGGAT
TACGAGTGGC AGGGGGACAG CCGACTCGGG GACATCTACA CGATCGCTTT CGTCCGCGGG
CTCGACGAGC ACGAGGTGCT CCGCCGACTC GGTGCCGCGG ACGAGGACAT TCGGCTGATC
ACAGACGAGG ACCACTCTCT GCCGGAAGGG CCAGAGGTCA TCACTGTGAG GCGAATCGGG
GATTGGACCA TCTCGATCGA GGACTGCGGC TGGCGCGCGC AGTGGCAGGC TCTGTCCGAC
CTGTCTCGCG ACGGCGGGGA GGTGGTGACA GTGCAGCGGC ACGACTACGC CCAGCACCAC
GTCGCCTATG CCGTCGACGG CCGGCTCATC ACCGGCATCA ACCCGAGGTT TCCCATAGAC
AGGCAGGGTG CGGATCCCGA CCGGCTCAAT CGTCACCTCC ATGAGCTGGG CATCGATCCG
GCCGCCGGCG ACTCCGTCGA CAACTCCATC CCGGCGGCCC TGACACTCGC CACCCGCATC
ACCGGCGTCA TGATCACTCC ACAACACCTT CACCGCCCCA TTCTCGGCGC CGCCATACCC
GGCGCCTATT TCTGA
 
Protein sequence
MSDADFTPLR VTYREGLSRD TSLRMRAWAK AKGYSVSERG RVAPEIIDAF LAAHPEVYEQ 
ARKFEMVHAT ARTPGASPED YEWQGDSRLG DIYTIAFVRG LDEHEVLRRL GAADEDIRLI
TDEDHSLPEG PEVITVRRIG DWTISIEDCG WRAQWQALSD LSRDGGEVVT VQRHDYAQHH
VAYAVDGRLI TGINPRFPID RQGADPDRLN RHLHELGIDP AAGDSVDNSI PAALTLATRI
TGVMITPQHL HRPILGAAIP GAYF