Gene Sros_6319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6319 
Symbol 
ID8669628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6928312 
End bp6929505 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341785 
Protein GI271967589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.187301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.50707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGG TCCTGCGCGA ACGCGGGTTC CGGCTCATCT ATCTCGGGAT GGCCGTCAGC 
CTGCTGGGTG ACGCCTCGCT GCTGCTGATC CCGGCGATCC TGGCCAAGAA ACTCACCGGC
TCGGACGGCG CCGCAGGGCT GACCCTGTTC TTCTTCACGC TGCCGCTGTG CCTGTCGCCC
CTCTTCGGCT ACGTGATCGA CCGCGTCGAC CGCAGGAGGT TCCTCATCGC CGCGTGCCTG
CTCTCGGCGG CGGCGCTGAC CCCGCTGACC GCGGTGACCG GCGGGGACAC CCTCTGGCTG
CTCTACCCGG TGTCGGCGGC CATGGGCTGC TCGTACGCGG CAATCTCCGG GGCCCTCAGC
GGCCTGCTGA AGAGCGTCCT GCCCGAGGAT CTCCTCGCCG AGGCCAACGG CGCCCTGCAG
ACCACCCGGC AGGGACTGCG CCTGGTCGGG CCGCTGCTGG GGGTGGCCGT CTACACGAGC
TCCGGCATCG GCGCCGTCGT CCTGCTCGAC GCCGGCACCT TCGTCATCGC CGCGGCGGCC
TTTGCGGCCC TGCCGAAACC GGCCCCCGTC CCGGCCGCGC CACGCGGCCG CTGGCGCGAG
GAGTTCTCGG CCGGAGCCCG CCACCTGGCC GCCGACCCGT TCCTGCGCCG CGCCGCCGGG
GCGTTCTGCC TGATGTTCGC GCTGGCCGGG GCGACCGAGT CGCTGATCTT CGCGGTCATC
GACCACGGCC TCGGCAGGGC TCCGGAGTTC ACCGCCCTCA CCTCCACCGC GATGGGCGTG
GGGGCGATCA TCGGCGGCCT GTGCGGGGCC ACGGTGATCA GGTGCCGGGG CGAGCTGTTC
GCGATCGGTA CGGGCATCGC CCTGTACGGC GTGGCGGTCC TGCTGTGGAC GGTCCCCGCC
GAGCCGGCCG TGCTGGGCGC GATGACGATG GCGGGCGCCG GCCTGACCCT CGCGGGCGTG
GCCCGGATGA CCCTCGTGCA ACGCCGTAGC CCCGGCCACC TCGTCGGCCG GGTCTCCACC
GCCTTCGAGG CCATGGCCGG AGCCACCCAG CTGCTGTCCC TGGTCGCGGG CGCGGCGCTG
GTGTCGCTCG TCGACTACCG CCTCCTGCTG GCCGTGGTCG GGCTGACCAT CTGCTGCGCG
GCGGCCCACG CGCTCCGGGG CCGGACACCG GCGGAACACC CCAGACCTGG TTGA
 
Protein sequence
MRAVLRERGF RLIYLGMAVS LLGDASLLLI PAILAKKLTG SDGAAGLTLF FFTLPLCLSP 
LFGYVIDRVD RRRFLIAACL LSAAALTPLT AVTGGDTLWL LYPVSAAMGC SYAAISGALS
GLLKSVLPED LLAEANGALQ TTRQGLRLVG PLLGVAVYTS SGIGAVVLLD AGTFVIAAAA
FAALPKPAPV PAAPRGRWRE EFSAGARHLA ADPFLRRAAG AFCLMFALAG ATESLIFAVI
DHGLGRAPEF TALTSTAMGV GAIIGGLCGA TVIRCRGELF AIGTGIALYG VAVLLWTVPA
EPAVLGAMTM AGAGLTLAGV ARMTLVQRRS PGHLVGRVST AFEAMAGATQ LLSLVAGAAL
VSLVDYRLLL AVVGLTICCA AAHALRGRTP AEHPRPG