Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6280 |
Symbol | |
ID | 8669589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6890709 |
End bp | 6891800 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | alcohol dehydrogenase |
Protein accession | YP_003341748 |
Protein GI | 271967552 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00748066 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0353239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGCGG TGGTCTTCGA CGCCTTCGGG TCAGATCTGC GGGTGTGCGA GGTGCCCGCT CCCGCGCCGC CGCCCGGCGG GGCGGTGATC CGGGTGGAGG CGACCGGGCT GTGCCGGAGC GACTGGCACG GCTGGCAGGG CCACGACCCG GACATCCGGG TCCTGCCGCA CGTTCCCGGG CACGAGCTGG CGGGGGTCGT CGAGGACGTG GGGCCGGGGG TGGGCTCGTG GCGGGCCGGT GACCGGGTGA CGGTCCCGTT CGTCTGCGCC TGTGGTTCCT GTACGGCGTG CGCGGCCGGC GACCAGCAGG TCTGCGAGCG CCAGACCCAG CCGGGCTTCA CCCACTGGGG CTCCTTCGCC GAGTACGTGG CGATCGAGAA CGCGGATGTG AACCTGGTGG CGCTGCCGGA GGAGATGACC TTCCCCACCG CCGCGAGCCT GGGCTGCCGC TTCGCCACCG CCTTCCGCGC CGTCGTGACG GTCGGCCGGG TACGGCCCGG CGAGTGGGTG GCGGTGCACG GCTGCGGCGG GGTCGGCCTG TCCGCCGTGA TGATCGCCGC CGCCGCGGGC GCACGGGTGG TCGCCGTGGA CGTCTCCCCC CAGGCCCTGG ACCTGGCCCG GCGGTTCGGC GCCGCCGCCT GCGTCACCGC CGCCGCTCCG GCCGCCGCTC CCGGCGCCGC TGACGTCCCG CCGGGCGGGG CCGGTGTCGC CGCACGCGTC CTGGAGCTGA CCGGCGGCGG GGCCCACGTC TCGATCGACG CCCTGGGCAG CCCGCAGACG TGCGCGTCGT CGATCGAGGG CCTGCGCCGC CGGGGCCGGC ACGTCCAGAT CGGCCTGCTG CCGGGCCTCA CCTCGCTGCC GATGAACCGG GTGATCGGCT ACGAGCTCGA ACTCCTCGGC AGCCACGGCA TGGCCGCCCA CGCCTATCCC GCGATGCTGG AGATGGTCGC CGCCGGCCTC CTCCGCCCGG ACCTGCTGAT CACCCGCACC GTCGGCCTCG ACGGAGCGGG ACCCGCGCTC GCCGCGATCG GCTCCGTGCC GGGCGTCACG ATGATCCTGC CGGGGGGACC GGAGGGTCCC CGACGCCCGT GA
|
Protein sequence | MRAVVFDAFG SDLRVCEVPA PAPPPGGAVI RVEATGLCRS DWHGWQGHDP DIRVLPHVPG HELAGVVEDV GPGVGSWRAG DRVTVPFVCA CGSCTACAAG DQQVCERQTQ PGFTHWGSFA EYVAIENADV NLVALPEEMT FPTAASLGCR FATAFRAVVT VGRVRPGEWV AVHGCGGVGL SAVMIAAAAG ARVVAVDVSP QALDLARRFG AAACVTAAAP AAAPGAADVP PGGAGVAARV LELTGGGAHV SIDALGSPQT CASSIEGLRR RGRHVQIGLL PGLTSLPMNR VIGYELELLG SHGMAAHAYP AMLEMVAAGL LRPDLLITRT VGLDGAGPAL AAIGSVPGVT MILPGGPEGP RRP
|
| |