| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6270 |
|---|
| Symbol | |
|---|
| ID | 8669575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6877786 |
|---|
| End bp | 6878814 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative tricarboxylic transport membrane protein |
|---|
| Protein accession | YP_003341738 |
|---|
| Protein GI | 271967542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0141318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTA GGCGGTTCTT TGTGCTCGCC CTGGGGGTCA TGGTCGCCGG CGGCTGCGGT
GGAGCGGGAG GCTCCCGCCT GCCGCCGGCG GGCCGGCTGA CCGTCGTCGC GCCCGCCGAG
CGCGGGCAGG GCTGGGACCG GGCCGCGCGT GCGCTGGCCT CGGTCCTGAC CGGGGACAGG
CTGGCGCGGG CGGCCGAGGT GAGCAACTAT CCGGGCGGCC TGGGCGCCGC CGCGCTGGGG
GCGTTCGCCG CCGCCCGCGA GCCCTTCACC CGCGAGGGCA GGCTGCTCCT GACCGGGATG
CCGATGGTGG CGGGGGCGGA GATCGCCAAC GCCGCCTCCG TGGTGGAGTC CACCACCCCC
CTGGCCCGCA TGGTCGGCGA CTGGGCGGCC CTGGTCGTCC CGGCGGGCTC CCGCCTGCGC
GCCTTCGAGG ACTTCGCCGC GGCGCTCCGC CGCGACCCGG CCGGGCTGGC GGTGGGCGGC
CGGATGGAGG GCGGCTCCGA CCATGTGCTC TACGGCATGA TCGGCAAGTG TCTCGGTGTG
GACACCCGGC TGCTGGACTA CGCCGGCTAC TCCAGCGGGG CCGAGGCCGC CCAGGCGCTC
CACGACGGCC GGGTGGCCGC GCTGCTGGGC TCGGCCCGCT CCTTCGTGCC CGAGATCGCC
GAGGGCCGCC TGCGTCCGCT GGTGGTCTCC TCCGCCGAGC GGATCGACGG GATCGACGCC
CCGACGCTGA TGGAGCTGGA CGTCCGCCTG GAGTACACCG ACTGGTGCGG CGTGCTCGGC
CCTCGCGGCA TGAGCTCCGA GGACAGGGAC GTGGCCGTCG CCCTGTGCGA CCGCGTCGAC
GCCTCGTCCC GCTGGCGGGC CATCTGCGCG GCCAACGGCT GGAACCGGGT CTACCTGAGC
GGGGACGACT TCCGGCAGTG GCTCGCCACC GAGACCCGCC GCACCCGGGA AGTGCTCAAC
GAGCTCGGGC TGCTGAGCAC TTTCGCCACA AGCTGTTGGG GTAGTTGCGT CCAGCGGCCC
TACATGTAG
|
|---|
| Protein sequence | MHRRRFFVLA LGVMVAGGCG GAGGSRLPPA GRLTVVAPAE RGQGWDRAAR ALASVLTGDR
LARAAEVSNY PGGLGAAALG AFAAAREPFT REGRLLLTGM PMVAGAEIAN AASVVESTTP
LARMVGDWAA LVVPAGSRLR AFEDFAAALR RDPAGLAVGG RMEGGSDHVL YGMIGKCLGV
DTRLLDYAGY SSGAEAAQAL HDGRVAALLG SARSFVPEIA EGRLRPLVVS SAERIDGIDA
PTLMELDVRL EYTDWCGVLG PRGMSSEDRD VAVALCDRVD ASSRWRAICA ANGWNRVYLS
GDDFRQWLAT ETRRTREVLN ELGLLSTFAT SCWGSCVQRP YM
|
|---|
| |