Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6229 |
Symbol | |
ID | 8669534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6839768 |
End bp | 6841627 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003341700 |
Protein GI | 271967504 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.109087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAGCC GGGCACTCGC GCACCGGCGC ACGACCCTGC AGCTGGCCTT CCAGTCGGCG GCCGAGCTGA TAACGCAGCG GATCAGGCAG CTCGGCGGGC AGGCGCACGC GCCGTCGTTC TCGACGTCGA TCAGCGTGCT GGCGCCGGCG CCGGCGCCCT TCTCCGGGAT GGACATCCTC GCGATGAGCC GCCTGGTGGC CGACCTGCAA CGGGCCGGGC GGGAGCTGCC CGAGGCGGGC CGCCGGTTGA GCGCCGAACT GTCGGCGCTC TGCCTCGCGG CCCCCTCCGG CCCGCAGATC GTCGACGCCG GGCTGTGGGC GGAGGAGCAG GTCCGGGACC TGCGGCAACG GCTGAACACG ATCCAGCGGC AGCATGATCT CGGCACGGTC TCCCAGGCGA TGGCCGGCTT CGGCCTGTTC GGCGGGCACG CCCCCGACCC GGACGGGGCC GGGAGGCTGA CGGCCGCCGC GGGCAACGGA GACGCCACGG CGTTGAAGGC GCTGCTGGAC ATGCAGCGGA CCGGCAGGGA CAGGACCCTC GCCGCCCGGC TCAACGCATG GTGGCGGCAC CTGGGCGCGG CGGTCCAAGA TCGGTTGATC GCCGCGTCGC CGAACCTGGT CGGTGGCCTG AACGGCCTCC CGGCCACGGT CCGGGACCGG GCCAACCGGA GGTGTCTGGC CGGGCGGAAG ACCGCGATCA CCGCAGAGCT GGAGCGGCTC CGCCGAACGT CGGAGGACGC GGAGGCGATG GTCGAGAAGC TGGAACAGGC CCTGCCCGGC CGTCCGACCG GCCCGTGGCT CGTGATTCCC GTGGAGTTGG AGGAGCTGTA CAGATCCTCC AGGAAGATGG ACGAGGCGAT CAGGGAGCTG GGGCCGGAGA TGCGGCAGAT CACGGCCGTG GAGAACGGGC TTGCCCTCGG CGGGCGGAAC GGCCGCCCTC CGGCGCTCCT GCTGCAACTG GAACTGGGAG GTCCGGGCAG GACCGCGATC TCCTTCGGAG ATCCCGACGA GGCCGACAAC CTGGTCACCT ATGTCCCCGG CACCGGCACC ACGCTGGAAG GCTTCACAGG GGACGCCAAC CGCGCCGCCG TCGTGTGGGA TCAGGCGCAC TACTTTCAAC CGGATAAGAA GATCGCTTCT ATCGCATGGC TCGGCTACAC GGCTCCGCAG TGGGAGGCAA CTCTTAGTTT GAACAGGACA GTTGTCAACA CGAATGCCGC AGAGATGGGC GCTCCGGCAC TGGCCAGTTT CGCTGACGGT CTGCATGCCG CGCACAAAGC GGCTTCCGGT GCCCGGTTCA CCGTGCTGGG CCACAGCTAC GGGTCGACGG TTACGGGTCT GGCTGCCCAG CAGCGTTCAG GTGCTTTTGC CGATCAGGTG ATCTTCGTGG GGAGTCCGGG CGTAGGGGCT GTGAAAGCGA AGGACCTGGG AGTCGGCTCG GTGTGGGTGG GGGAGGCGCC CAACGATCCG GTGGGCGACG TGGGCTCCCT TCCTCTCCAG TTCACCGGGA CCTTCGATGA CGCCGCGCCG TACCTCCTGA AGGTGAGCGG TCCGCTCGGT GTCGACCCCA GCGCACCTGA ATTCGGTGCC CAGCAGTTTT ATGTGAAGGA CAGTGGGGAT CCTGCTCACA CCTTCAGTGC CCACTCGAAG TACTGGGATG TGAACTCTAC GTCCCTCAAG AATCTCGGAT ACCTGATCAA TGGTCAGTAC GGAGCTCTCA TCCCCTTTCC TGACCCGCCC GTCGGGTCGG CGGAGATTCT GTCGCCTCTC GCCACGTCGC CCTCCCCGCA GTCGCCATCG ATCTCGACCC GGAATCCGTC ACCTCATTCG CTTCCCTCGT CCACACCGGC CGGAGGATAG
|
Protein sequence | MFSRALAHRR TTLQLAFQSA AELITQRIRQ LGGQAHAPSF STSISVLAPA PAPFSGMDIL AMSRLVADLQ RAGRELPEAG RRLSAELSAL CLAAPSGPQI VDAGLWAEEQ VRDLRQRLNT IQRQHDLGTV SQAMAGFGLF GGHAPDPDGA GRLTAAAGNG DATALKALLD MQRTGRDRTL AARLNAWWRH LGAAVQDRLI AASPNLVGGL NGLPATVRDR ANRRCLAGRK TAITAELERL RRTSEDAEAM VEKLEQALPG RPTGPWLVIP VELEELYRSS RKMDEAIREL GPEMRQITAV ENGLALGGRN GRPPALLLQL ELGGPGRTAI SFGDPDEADN LVTYVPGTGT TLEGFTGDAN RAAVVWDQAH YFQPDKKIAS IAWLGYTAPQ WEATLSLNRT VVNTNAAEMG APALASFADG LHAAHKAASG ARFTVLGHSY GSTVTGLAAQ QRSGAFADQV IFVGSPGVGA VKAKDLGVGS VWVGEAPNDP VGDVGSLPLQ FTGTFDDAAP YLLKVSGPLG VDPSAPEFGA QQFYVKDSGD PAHTFSAHSK YWDVNSTSLK NLGYLINGQY GALIPFPDPP VGSAEILSPL ATSPSPQSPS ISTRNPSPHS LPSSTPAGG
|
| |