Gene Sros_6172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6172 
Symbol 
ID8669474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6773234 
End bp6774487 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341645 
Protein GI271967449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.272957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGG TCATCGTGGG TGCCGGCATC GGCGGGCTGG CCGCAGCCCT GAGCCTGCAC 
GCGGCGGGCA TCACCGACGT AGTGATCGCC GAGGCCGCCG CGGAGCTGCG CCCGCTGGGC
GTGGGCATCA ACCTGCTCCC GCACGCGGTT CGCGAGCTGA CCGAGCTGGG CCTGGCCGAC
CGGCTCGCCG GGATCGGCGT GGCCACCGGG GAACTCACCT ACTACAACCG TTACGGTTCG
CGAATCTGGT CCGAGCCCCG CGGCCTGCGC GCCGGATACC GGTGGCCGCA GTTCTCTGTG
CATCGAGGCC GGCTGCAGAT GCTGCTGCTG GCGGAGGTGC GCAGGCGCCT GGGCGAGGCC
GTGGTTCGGA CGGGTCACGC GCTCACCGGA TTCCATCAAG AAGGCGGCAC GGTGTCGGCC
CGATTCGCGA CGGCCCGAGG AGAAACCGAG TTGACCGGCG ACGTGCTCAT CGGCGCCGAC
GGAATCCATT CGACGGTCCG GGCCCTGCTC TACCCCGATG AGGGGCCGCC GCCGTGGAAC
GGCCTCGTCC TGTGGCGCGG GGTGTCCCAG GCGCGGCCCT TCCTCTCCGG CCGTTCCATG
ATCATGGCCG GGGACGGCAC CACGAAGTTC GTCGCCTATC CGATCCAGGA CACGGCCCCG
AACCTGATCA ACTGGATCGC CGAGCGCCCC ATGGAGAAGG CCGTCGCGCG CGGTGACTGG
AATCGGCCCG TGGAGCCCTC CGAGATCCTT CGCCACTTCG GCGACTGGCG GTTCGACTGG
CTGGACGTGC CCGGGCTGAT CTCGGCGGCC GACGCCGTCT ACGAATACCC GATGGTCGAC
AGGGACCCTC TCCCCCGTTG GTCGTACGGC CGGGTGACCC TGCTCGGCGA CGCCGCCCAC
GCCATGTACC CGATCGGTTC CAACGGCGCC TCCCAGGCGG TGATCGACGC CCGTGTGCTC
GCCTGCGAAC TCGCCGCCGG CCGCGCCCCG GAGCAGGCGC TGACCGCCTA CGAAGAGCGC
CGGCGACCCG TCACGACCAC GCTCTGCCAG GCCAACCGCG GCATGGGGCC CGAAGTCGTG
ATGAAGATCG CCCACGAGCG CGCCCCGAGC GGGTTCACCG ACATCGAGGA CGTGATCCCG
ATGACCGAGC GCGAGAGCAT CGCGGCCGAC TACAAGCGCA CCGCCGGTTT CGATCCCCGC
CTGCTCAACG AACGCCCCTC CTACGGCGTG GAGCCGGCAT GGGTCTCGAA CTGA
 
Protein sequence
MPVVIVGAGI GGLAAALSLH AAGITDVVIA EAAAELRPLG VGINLLPHAV RELTELGLAD 
RLAGIGVATG ELTYYNRYGS RIWSEPRGLR AGYRWPQFSV HRGRLQMLLL AEVRRRLGEA
VVRTGHALTG FHQEGGTVSA RFATARGETE LTGDVLIGAD GIHSTVRALL YPDEGPPPWN
GLVLWRGVSQ ARPFLSGRSM IMAGDGTTKF VAYPIQDTAP NLINWIAERP MEKAVARGDW
NRPVEPSEIL RHFGDWRFDW LDVPGLISAA DAVYEYPMVD RDPLPRWSYG RVTLLGDAAH
AMYPIGSNGA SQAVIDARVL ACELAAGRAP EQALTAYEER RRPVTTTLCQ ANRGMGPEVV
MKIAHERAPS GFTDIEDVIP MTERESIAAD YKRTAGFDPR LLNERPSYGV EPAWVSN