Gene Sros_6115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6115 
Symbol 
ID8669413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6707144 
End bp6708418 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003341589 
Protein GI271967393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.126584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAATC CTGATCTGAT CTTCGCGCTG GCAGGCGCCG GAGCCCTGCT CGCGGCCGTC 
CTGCCCCGGC TGCTCAACCG GCGGCCCTTC TCGCTGCCGC TGGCCTGCCT GCTCGGCGGG
ATCCTGCTCT ACCTCCTGCC ACTGGACCTG CCCAGGCCCG ACCCCGTGGC CCACCGGGCC
CTCGTCGAGC ACGCCACCGA GATCTGCGTG CTGATCTCGC TCATGGGCGC CGGGCTCGCG
ATCAACCGGC CCTTCGGGCT GCGCGGCTGG GCCTCCACCT GGCGTCTGCT GGGATGGACG
CTCCCGCTGA CCGTCGTAGG AGTGGCCGGC GCCGCCTGCC TCCTGCTGGG CTGGCCCCCG
GCCGCGGCAC TGCTGCTGGG CGCAGTGCTC GCCCCGACCG ACCCGGTGCT CGCCTCCGAC
GTGCAGGTCG GCGAGCCCGT CGACTCCGAG AAGGCGGACG ACGAGGTCAG GTTCACCCTC
ACCTCCGAGG CGGGGCTCAA CGACGGCCTG GCCTTCCCCC TGGTGTTCGC CGCCATCGCG
ATGGCGGCCG CCGGCGGCTT CGGCTGGGCC GGGGAGTGGG TCCTGGTGGA CCTGCTCTAC
AGGTGCGGGG CGGGACTGCT CTGCGGCCTG CTGGCCGGAA AGCTGCTGGG CCGGCTGTTC
TTCCGCGCCC AGGTGTCCGA CCTGCGGCTC GCCGAGCACA GGGACGGCTT CGTCGCGCTG
GCCGCGACGT TCCTGGCGTA CGGCCTCACC GAGCTGGTGC ACGGATACGG CTTCATCGCG
GTGTTCGTGA CCGCGTGCAC CATCAGGGCC GCCGAGCGCA GCCACGGCTA CAACGGTGTG
CTGCACGGCT TCATCGAGCA GATCGAGCGG CTGTTCACCG CCTGGCTGAT CCTGCTGCTC
GGCGGGTTCG TGGCGGTCGG CGGCCTGGCC GCGCTCACCT GGCGGGGCGC GGCCGTCAGC
CTGCTCCTGC TGCTGGTGAT CCGGCCGCTG ACCGGCTGGG TCGCCCAGCT CGGCGGGCGG
GCGGGGCCGC GCGAGCGCGG CGTGACGGCG GTCTTCGGCA TCCGCGGCAT CGGCTCGCTG
TTCTACCTCG CCTACGCCCT CGGGCACGCC GACTTCGGCG TGCCCGCCGA GGAGCTCTGG
GCGGTGGTCG CCTTCACCGT GCTGGCCTCC CTGGTCCTGC ACGGGGTCAC CGCGACGCCG
ATCATGACGC GGCTGGACCG CCTGCGTGAC AGGGCGGGGG ACGCGGAGAC CGAGCCCGCC
GCCCGCCACC TGTAG
 
Protein sequence
MGNPDLIFAL AGAGALLAAV LPRLLNRRPF SLPLACLLGG ILLYLLPLDL PRPDPVAHRA 
LVEHATEICV LISLMGAGLA INRPFGLRGW ASTWRLLGWT LPLTVVGVAG AACLLLGWPP
AAALLLGAVL APTDPVLASD VQVGEPVDSE KADDEVRFTL TSEAGLNDGL AFPLVFAAIA
MAAAGGFGWA GEWVLVDLLY RCGAGLLCGL LAGKLLGRLF FRAQVSDLRL AEHRDGFVAL
AATFLAYGLT ELVHGYGFIA VFVTACTIRA AERSHGYNGV LHGFIEQIER LFTAWLILLL
GGFVAVGGLA ALTWRGAAVS LLLLLVIRPL TGWVAQLGGR AGPRERGVTA VFGIRGIGSL
FYLAYALGHA DFGVPAEELW AVVAFTVLAS LVLHGVTATP IMTRLDRLRD RAGDAETEPA
ARHL