| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6067 |
|---|
| Symbol | |
|---|
| ID | 8669361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6647466 |
|---|
| End bp | 6650276 |
|---|
| Gene Length | 2811 bp |
|---|
| Protein Length | 936 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003341542 |
|---|
| Protein GI | 271967346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.229661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGTG ATAACGGGCG TGACGGCGCG GGCCGGCGCG ACGAAGGCGA GAACCGCGGA
TCTGGCGGTC AGGGAGGCTA CCGCGGCGAT CGCGCAGGTA GCGACAGAGG GCGTCCGGGA
GACGGCCCTC GATATGGCGA GCGCCGCGAG GGGCGTTCGG GCGGGTCGTA TGGTTCTCGC
GATCGAGGCG ACCGTCCGGC CGGCGGTTAC CGCGACAGCC GCAGTGGAGG CGACCGGCCT
CCGTTCAATC GTGACGACCG TCCAGGCGGT GGCGGTCAGC GCTCCTATGG CTCTCGCGAC
GGGGGCCAGC GTCCCTCCGG GCCGCGTGAC AGCGGGGAGC GTCGCTCCTA CGGCGACCGC
GACCAGTCCC GCGGCACCTC CTATGGTTCG CGTGACGGCG GCCAGCGTCC GCCGTTCAAC
CGTGACGACC GTGGTGGGCG TCCTGGTGGG GAGCGTCGTT CCTACGGTGA CCGTGATGGT
GGTCAGCGTC CGCCGTTCAA CCGCGATGAC CGTCCCGGTG GTGGGGAGCG TCGTTCCTAC
GGGGATCGTG ACCAGGCGCG TAGCCAGTAC GGTTCGCGTG ACGGCGGCGG GCGACCCCCG
TATAACCGTG ATGACCGTCC CGGTGGCGGT GGGCGGCCTC CGTTCGATCG TGACGATCGT
GGTGGGCGGC CTCCGTTCAA TCGTGACGAT CGTGGTGGGC GTCCGCCGTT CAACCGTGAT
GACCGTCCCG GTGGTGGGGA GCGTCGTTCC TACGGTGACC GTGATGGTGG TCAGCGGCCT
CCGTTCAACC GCGATGACCG TGGTGGGCGT CCGCCGTTCA ATCGTGACGA TCGTGGTGGG
CGGCCTCCGT TCAATCGTGA CGATCGTGGT GGGCGTCCGC CGTTCAACCG TGATGACCGT
CCCGGTGGTG GGGAGCGTCG TTCCTACGGG GATCGTGACC AGGCGCGTAG CCAGTACGGT
TCGCGTGACG GCGGCGGGCG ACCCCCGTAT AACCGTGATG ACCGTCCCGG TGGCGGTGGC
GGTGGGCGGC CTCCGTTCAA TCGTGACGAT CGTGGTGGGC GTCCGCCGTT CAACCGTGAT
GACCGTCCCG GTGGTGGGGA GCGTCGTTCC TACGGTGACC GTGATGGTGG TCAGCGGCCT
CCGTTCAACC GCGATGACCG CGGTGGGCGG CCTCCGTTCA ACCGTGATGA CCGTCCCGGT
GGTGGGGAGC GTCGTTCCTA CGGGGATCGT GACCAGGCGC GTAGCCAGTA CGGTTCGCGT
GACGGCGGCG GGCGACCCCC GTATAACCGT GATGACCGTC CCGGTGGCGG TGGCGGTGGG
CGGCCTCCGT TCAATCGTGA CGATCGTGGT GGGCGTCCGC CGTTCAACCG TGATGACCGT
CCCGGTGGTG GGGAGCGTCG TTCCTACGGG GATCGTGACC AGGCGCGTAG CCAGTACGGT
TCGCGTGACG GCGGCGGGCG ACCCCCGTTC AATCGCGATG ACCGTGGTGG GCGGCCTCCG
TTCAACCGTG ATGACCGTCC CGGTGGTGGG GAGCGTCGTT CCTACGGGGA TCGTGACCAG
GCGCGTAGCC AGTACGGTTC GCGTGACGGC GGCGGGCGAC CCCCGTTCAA CCGCGACGAC
CGTGGTGGGC GGCCTTTCGG TGCCCGTGAA GGCGGATTCC GCGGTGAAGG CGAAGGTTCT
CGTGCCCGTT ACGGCCGAGA CGACCGGCCT ACCGGCCATG ACGAGGCGCC GAGCCGAGAG
CGTGAGGAGC TGCCTCCTCT CGCTCCGGAC ATCACGGCGG AGGAACTCGA CAAGGAGGTC
AGGGAGGAAC TGCGTTCCCT CCCGCTCGAC CTTGCCGATC TGATCTCTCG CCATCTCGTG
GCGGCTGAGC GTGCCCTCGG TGAGGGCGAC GCAGAGCAGG CCTATGAGCA CACCAAGGTG
GCCCGTCGCT TCGCTGCCCG GATCGGTGTG ATCCGCGAGG CCGTCGGCAT CGCCGCCTAC
CACGCCGGGC ACTTCGCCGA GGCGCTGAGC GATCTGCGCG CGGCGCGTCG TATGACGGGC
TCCGACGCGT TCCTGCCGAT CATGGCGGAC TGCGAGCGCG GCCTCGGCCG TCCTGAGCGG
GCCCTCGATC TGGTCCGTTC CAAGGAGGCC GAGCGTCTCG ACCGGATGGG CAAGATCGAG
CTCGCCATCG TGGAGTCTGG CGCCCGCCGG GACCTTGACC AGAAAGACGC CGCGGTCATC
ACCCTGCAGC GTCTGCCGGA GCTGCGCGAC ACCCGTCCGC AGCCCTGGTC GGCACGCCTC
GCCTTCGCCT ACGCCGATGC TTTGGCCGAC GCCGGCCATG AGGAGCCCGC CACCGAATGG
TTCGGCCGGG CCATGGCCTT CGACGAGGAC GGGGAGACCG ACGCGGCCGA GCGCTATGCG
GAGCTGACCG GTGCGGTCAT CGAGGATCTC GAAGAGGACG AGGACGACGA GGACGTCGAC
AATGAGCTCG ATGTCGATCT CGAAGACGTA GAGGTCAACG ACGAGTTCGA GGACGCGGAC
GAGGACGAGG ACATCGAGGA CGAGGCGGAC ATCAAGATTG ACGATGTCGC CACTCTCGAC
GCGGAGATCG AGGCCGAGGA CGAGCTCGAC GAGAACGAGC CCCTCATTGA CGAGCTTCGT
GACGACGAGG CTCCCGCCGT CGAGGAGAAG GTCCAGGACA AGCCCGGCGA GAAGGTCGAA
GCCGGTGTCG GGCCGGCCTT CATCGAGCCT GACTTCGGTG ACATCCTCGA CGACCCCGCG
GATGTCGACG GCGATGACGA GGACGAGGAC AAGGCCGAGA AGAAGAAGTG A
|
|---|
| Protein sequence | MNSDNGRDGA GRRDEGENRG SGGQGGYRGD RAGSDRGRPG DGPRYGERRE GRSGGSYGSR
DRGDRPAGGY RDSRSGGDRP PFNRDDRPGG GGQRSYGSRD GGQRPSGPRD SGERRSYGDR
DQSRGTSYGS RDGGQRPPFN RDDRGGRPGG ERRSYGDRDG GQRPPFNRDD RPGGGERRSY
GDRDQARSQY GSRDGGGRPP YNRDDRPGGG GRPPFDRDDR GGRPPFNRDD RGGRPPFNRD
DRPGGGERRS YGDRDGGQRP PFNRDDRGGR PPFNRDDRGG RPPFNRDDRG GRPPFNRDDR
PGGGERRSYG DRDQARSQYG SRDGGGRPPY NRDDRPGGGG GGRPPFNRDD RGGRPPFNRD
DRPGGGERRS YGDRDGGQRP PFNRDDRGGR PPFNRDDRPG GGERRSYGDR DQARSQYGSR
DGGGRPPYNR DDRPGGGGGG RPPFNRDDRG GRPPFNRDDR PGGGERRSYG DRDQARSQYG
SRDGGGRPPF NRDDRGGRPP FNRDDRPGGG ERRSYGDRDQ ARSQYGSRDG GGRPPFNRDD
RGGRPFGARE GGFRGEGEGS RARYGRDDRP TGHDEAPSRE REELPPLAPD ITAEELDKEV
REELRSLPLD LADLISRHLV AAERALGEGD AEQAYEHTKV ARRFAARIGV IREAVGIAAY
HAGHFAEALS DLRAARRMTG SDAFLPIMAD CERGLGRPER ALDLVRSKEA ERLDRMGKIE
LAIVESGARR DLDQKDAAVI TLQRLPELRD TRPQPWSARL AFAYADALAD AGHEEPATEW
FGRAMAFDED GETDAAERYA ELTGAVIEDL EEDEDDEDVD NELDVDLEDV EVNDEFEDAD
EDEDIEDEAD IKIDDVATLD AEIEAEDELD ENEPLIDELR DDEAPAVEEK VQDKPGEKVE
AGVGPAFIEP DFGDILDDPA DVDGDDEDED KAEKKK
|
|---|
| |