| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5993 |
|---|
| Symbol | |
|---|
| ID | 8669287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6568036 |
|---|
| End bp | 6569472 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003341470 |
|---|
| Protein GI | 271967274 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0314431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.163759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCATCA CCGGAGCGCG CGCTCCGCGC CCATCGGCGG CACGGCGGAC GGGACCGGTC
TGGCCGAGCC TGGCCGCGGG CCTCGCCGCC ACGGTCGTCG CCGTCGCCGG CTCGTGGCGG
GTCTCCCAGT CGTCGGACGA GCTGGCCACC CTCAGCGCGG CCCGCCGGAG CGCGGCGGGC
CTGTGGGAGC TCGCGCAGCA CGTCGACGGG CACTTCCTGC CCTACTACGC GTTCATGCAC
CTGTGGGCGG GGTTCGGCCA GGCCGAGTGG TGGCTGCGGC TGCCCTCGGC GATCGCGACG
GGCGCGGCGG CCGCGCTCAT CGCCGGCCTG GGACGGCGCC TGCACTCCCC GGCCGCCGGG
GTGGCGGCCG CCGCCATATA CGTTTTCCTG CCGTCGGTAT CCCATCACGG GCAGAACGTC
CGCCCCTACG CCTTCGCGGC CGCCGCCGCG GTGCTGGCCG CCTGGGCGCT GCACCGCGCG
ATCGAGGAAC CGGGGCGGCG CGGCGGCCGG TGGGGATACG CCGCGGCCGT CGCCCTGCTC
GGCTGCACGC AGGTGTTCGC CCTGCTCGTG CTGGCCGCCC ACGTGCTCGC CATGACGCTG
TACGGCCGGG GCGCCCTGGC CAGGATGCTG CCCGCCCTGG CCCTGGGATG CGTTCCGGGG
GCCGTCTGGA CCGTGGTCGG CTTCGCCGAG CGGCACGCCA TCCGGTGGAT CGACATGCCC
GGCCCCGCGG TCTTCCTGGC CCTGCCCAGG ACGGCCGGGG GCACCATACC GGCGGGCTGC
GTCCTACTGG CCCTGGCGGC CGCCCCGCTC CTCCTGCGGA CGCGGCGCGC CCACGGGCTC
TGGCCCACGC TGCTGGCCGC CTGGGCCCTG CTGCCGCCCG TCCTGCTGTT CGCCCTGTCG
CACCTGCTCT CCCCCGTCTA CGTCGACCGC TACCTGTTCG CGACGGTGCC CGCCTACGCG
CTGCTGGCCG GTCTCGCGCT CGCCTCGATG CCCCACCTGC TCGCCGCGCT CGCCCTGGCG
GGTGCCCTGG CCGCGGGGCT GCCCGGACAG CTCGACCTGC GCAGGGAGGA CGGGCACCGC
GAGAGCTTCC CCCGCGCGGT GCGGATCATC TCGGCGAACG CCCTGCCGGG CGACGCGATC
GTGTACGGCG GGTCGTGGCT GCGGACCGGG ATGCTCTACT ACGGCGGGCG GGGCCTGCCC
GACGACGTGC TGCTCCTGGA CGCCGACCCC CGGCCGGTGT CCTTCGACTA CCCCGAGCGC
GCCGACGTCT CCGCCGCCCT CGACGGGCGC GAGCGGGTCT GGGCGCTCTG GCGGGGCCCC
GCCGGGGCGG CCCTGCGGAT CGGCAGGCTC GACCCGCTGG TCCAGCGGTT CACCCGCAGC
CGGACGTGGC ACGCGGGGCG GTCGCCCGGC ATGACCGTGG CCCTCTACAC CCGTTAG
|
|---|
| Protein sequence | MIITGARAPR PSAARRTGPV WPSLAAGLAA TVVAVAGSWR VSQSSDELAT LSAARRSAAG
LWELAQHVDG HFLPYYAFMH LWAGFGQAEW WLRLPSAIAT GAAAALIAGL GRRLHSPAAG
VAAAAIYVFL PSVSHHGQNV RPYAFAAAAA VLAAWALHRA IEEPGRRGGR WGYAAAVALL
GCTQVFALLV LAAHVLAMTL YGRGALARML PALALGCVPG AVWTVVGFAE RHAIRWIDMP
GPAVFLALPR TAGGTIPAGC VLLALAAAPL LLRTRRAHGL WPTLLAAWAL LPPVLLFALS
HLLSPVYVDR YLFATVPAYA LLAGLALASM PHLLAALALA GALAAGLPGQ LDLRREDGHR
ESFPRAVRII SANALPGDAI VYGGSWLRTG MLYYGGRGLP DDVLLLDADP RPVSFDYPER
ADVSAALDGR ERVWALWRGP AGAALRIGRL DPLVQRFTRS RTWHAGRSPG MTVALYTR
|
|---|
| |