Gene Sros_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5960 
Symbol 
ID8669254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6533256 
End bp6534281 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content79% 
IMG OID 
ProductMolecular chaperone GrpE (heat shock protein)- like protein 
Protein accessionYP_003341438 
Protein GI271967242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00069355 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0677682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC GACGCGGGCT CCTGCCCCTG CTGCTCCTGG CCTGCCTGAC GGTGACCGGC 
TGCGGCCCGG TGGCGGGTTC CGGCGGGGGG ACGGCGGCCA CCGCGCCGCC GGCGCCCGTG
CGGGCCGGCG GATCGGCCGG AGACGGCGTC CCGCCCCCGC AGGCCAGGAG TCACCGGACC
GGAACGGCCG GGACGGGAAC GGCGGGCGGG TCATTCCCGC TGCCGCTGCC ACTGCCGCTG
CTTCTCGCGC TGGCGTCGGG ATCCGTCGTC GCGGTCGCCG CCGGGGTCCA CCTCCGGCGG
CGGAACCGGC GGCCCGCGCC CGCCCCTGCC CCGGCCACGT GGCAGGGCGG GCCCGCCCTG
CCGGAGCCCC CCGGCTCCGC GATCCCGCGG GCGCCCGCCA CACCGCGCAC ACCGCCCATC
CCACCCCCGC TCCACCCGGC CCCGCAGGCC CCGCCCGCCG TACCTCCCGC ACCGCACGCG
GCCCCGCAGG CGCCTGCCAC ACCGCACCAC GCATCGCAGC CTCCGCCCGC CGTACCTCCA
CCGCACCCGG TCCCGCAGGC GCCTGCCACA CCGCACCACG CATCGCAGCC TCCGCTGCAG
CAGGCCGCTC CTGCCGCGTC CGACCCGATG GCCGACGCGC TGGCGGAGGT CGCCGGGAGC
GGGATCAGCC AGGCGCTCAC CCAGCAGGTG GAGCGCCTGT TCGCCGAGGG CCGTCCGGGG
CGTGAGGCCC TGGTGGAGGC CTGCATCGGC TGCCGGGACC AGATCGCCGA GCGGCATCCC
CGGCTGGCCG GCACGCTGCT GGACGGGCTG AACCGGGCCG GGGTCCGGGA GATCGTCGCG
GACGGGCAGC GCTTCGACCC GCGCGTGCAC GAGGCGTTCG GCACCGAGCC GACCGAGCGG
CCGGAGCTGC ACGACGTCGT CGCGGAGACC GTCAAGCGGG GGTACGCCGA CGGTGACCGT
GTGATCCGCG TGCCGCAGGT CGCCGTCTAC CGGCACGGGG CACCCGGAAC CGGGACGGAG
CCGTGA
 
Protein sequence
MTDRRGLLPL LLLACLTVTG CGPVAGSGGG TAATAPPAPV RAGGSAGDGV PPPQARSHRT 
GTAGTGTAGG SFPLPLPLPL LLALASGSVV AVAAGVHLRR RNRRPAPAPA PATWQGGPAL
PEPPGSAIPR APATPRTPPI PPPLHPAPQA PPAVPPAPHA APQAPATPHH ASQPPPAVPP
PHPVPQAPAT PHHASQPPLQ QAAPAASDPM ADALAEVAGS GISQALTQQV ERLFAEGRPG
REALVEACIG CRDQIAERHP RLAGTLLDGL NRAGVREIVA DGQRFDPRVH EAFGTEPTER
PELHDVVAET VKRGYADGDR VIRVPQVAVY RHGAPGTGTE P