Gene Sros_5743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5743 
Symbol 
ID8669037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6286571 
End bp6288004 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content74% 
IMG OID 
ProductSuccinate-semialdehyde dehydrogenase 
Protein accessionYP_003341234 
Protein GI271967038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.18413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG GACAGGCCCT CGTCGGAGGG CGCTGGCGGG ACGCGGCGGC GCGTTTCCCG 
GTGACCGACC CGGCGACCGG CGAGACGATC GCCGAAGTGG CCGACTGCGA CGGGAGGCTG
ACGGTCGAGG CCGTCGACGC GGCGGCCGCC GCGCTCCCCG CCTGGCGCGC CATGCCCGCC
CACGAGCGCG CCGCGATCAT GCGCCGGGCC GCCGAGCTGC TGGCCGGACG GGCCGGGGCG
ATCGGCGCGG TCATGACCGC CGAGCAGGGC AAGCCCCTGG CCGAGGCCAC CGGCGAGGTG
GTCGCGGGAG CCGACCACCT CCTGTGGGCC GCCGAGGAGA CGCGCCGCGT GTACGGCGAG
ACCATCCCCT CCACCAGCAC CGACACCCGC ATCTGGCTGC TTCCGGAACC GGTGGGCGTC
GTCGCGGCGA TCACCCCCTG GAACTTCCCG GTCTCGATGA TCACCCGCAA GCTGGGCCCG
GCCCTCGCCG CGGGGTGCAC GGTGGTGCTC AAACCCTCCG AGCTCACCCC GCTGTCGGCC
GTCGCGGTCG CCGAGTGCCT GACCGAGGCG GGCTTCCCGC CGGGCGTGTT CAACCTGGTC
ACCACGGCCC GGCCGCAGGA GTTCGCCGAG GCGATCATGG CCGATCCGCG GGTCAGGAAG
ATCTCGTTCA CCGGTTCGAC GGCGGTCGGC AAGAACCTGA TCCGGCAGAG CGCCGACGAC
GTCAAACGGC TCAGCGTCGA GCTGGGCGGC CACGCCCCGG TGCTCGTCTT CCCCGACGCC
GACGTGGCCG CCGCCGCCGC GGGCGTGGCC CGGAGCAAGT TCATGAACGC CGGCCAGGCC
TGCACGTCCC CCAACCGGAT CTACGTGCAC GAGTCCGTCG CCGCGGAGTT CACCGACGAG
CTGGTCAAGC TGGCCGAGGC GATCACCGTG GGCAACGGCG CGGACCCCGG CGTCACGATG
GGCCCGCTGA TCGACGACCG GGCGCTCGCC AAGGTCCGGC GGCACATCGA GGACGCGCTC
GCGCACGGCG CCCGGCTGGC GACGACCCGC CGGGAGGGGC CCGGAAGGCT CCACCCGCCC
ACGGTCCTGA CCGGCGTCAC CGACGAGATG CTCCTGTGCC GGGAGGAGAC CTTCGGCCCG
GTCGCCCCGG TCCTGACCTT CGGCGACGGC GAGTCCACCG AGGAGGTCGT GGCCAGGGCC
AACGCCACGC CGTACGGCCT GGCCGCCTAC CTGTGGACCC GCGACCTGGC CCGGGTCGTG
CGCGTCTGCG AGGACCTGCA GTTCGGCATC GTCTCGGTCA ACGGAGCCCC GCTCGCCCCG
CCGCAGGGGC CGTTCGGCGG GGTCAAGGGC AGTGGATACG GCCGCGAGGG CGGCCATCAC
GGAGTGGAGG ATTTCGTGGA GTACAAGTAC GTCAGCGTGG GGCTGGGCCG ATGA
 
Protein sequence
MKTGQALVGG RWRDAAARFP VTDPATGETI AEVADCDGRL TVEAVDAAAA ALPAWRAMPA 
HERAAIMRRA AELLAGRAGA IGAVMTAEQG KPLAEATGEV VAGADHLLWA AEETRRVYGE
TIPSTSTDTR IWLLPEPVGV VAAITPWNFP VSMITRKLGP ALAAGCTVVL KPSELTPLSA
VAVAECLTEA GFPPGVFNLV TTARPQEFAE AIMADPRVRK ISFTGSTAVG KNLIRQSADD
VKRLSVELGG HAPVLVFPDA DVAAAAAGVA RSKFMNAGQA CTSPNRIYVH ESVAAEFTDE
LVKLAEAITV GNGADPGVTM GPLIDDRALA KVRRHIEDAL AHGARLATTR REGPGRLHPP
TVLTGVTDEM LLCREETFGP VAPVLTFGDG ESTEEVVARA NATPYGLAAY LWTRDLARVV
RVCEDLQFGI VSVNGAPLAP PQGPFGGVKG SGYGREGGHH GVEDFVEYKY VSVGLGR