Gene Sros_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5618 
Symbol 
ID8668912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6153401 
End bp6154696 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content77% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003341113 
Protein GI271966917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.180285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.667529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCC CCGGGTGGAG GCCGGACCGG AACCCGGGCG GATACCGTCT CAACGTGGAC 
GACCTCAACC TGGACGGCTC GCTGCTCCTG CGGCGGTGGA GCCGCGGCCA GCTCATCGCG
CTCGACGCTC TGGCAGGAGC GGCGTACACG ATCACGCTCC TGACGTTCGC GGCCGCGCGG
CCCGCCACGG AGACGCCGCT GTGGGCCCAG TCCCTGCTCG TGGCCGTGAC CGGGTCGGCA
CTCGCCCTGC GGCGGCGGTG GCCGCTGCCC GTCTTCGTCC TCGCCCTCGG GACGTCCCTG
GCGTCGATGT TCCTCGGCCT GGTGCACGAC GGGTTCGCCG CGGCGGCCTT CGCGCTCTAC
CTCGTCGCGC TCACCCGGCC CAGGCCCCGG TGGGAGCCGA CGGTCACGAT CGGCGTGGGC
AGCGCGGCCG CCGTGGTGAT GCTGTCGGTG GCGGGCAGCC CCGACCCCGG CTGGTGGCTG
CGCCTCCTCG GCGTCCTCCT GCCGTGCGTG GCGCTCCTCG GCGGCACCTG GACGGTCGGC
CGCGCCGTGC GCGAGCGGCG CGCGTACGCG GCGCGGGCGG CGGAGCAGCT CGCCGACCGG
GCGGTCACCG AGGAGCGCCT GCGCATCGCG CGCGAGCTGC ACGACGTCGT CGCGCACAGC
ATGAGCCTCA TCGCGGTCAA GGCGGGGATC GCCAACCACG TCGCGGAGGC CCGGCCGGAG
GAGGCCAGGG ACGCGCTGCG CGTCATCGAG GCCACCAGCC GGGGAGCGCT CACCGAGATG
CGCCACCTGC TGGGCGTGAT GCGCTCCGGC ACGGCGCCGG ACCCGGGCTC CGGCCTCTCC
CCCGCGCCCG GCCTCGCCGG CCTGCCCGGA CTGGCCGACC GGGCGGCGCT GGCCGGCGTC
CGCGTCGAGC TGGACGTCAC CGCGGCCGCG CTGCCGGAGG GGCGTCGAGC TGTCGGTCTA
CCGGATCGTG CAGGAGGCCC TGACCAACGT GGTCAGGCAC GCCGCGCCGG CGCGCTGCCG
GGTGGTGGTC GAGGCGGACG GGCGGGAGGC ACGGGTCGAG GTGACCGACG ACGGTCCGGG
CCACCGGGTC CTGCCGGGCC AGCCCGGTCA CGGGCTGGCC GGAATGCGGG AGAGGGTCCT
CATGTACGGA GGGTCCTTCA CGGCCGGGCG ACGGCCGGAG GGCGGGTTCG GGGTGTCGGC
ACGGCTGCCC TACGGCGGGA GCACGCCGTA CGGCGGGCCC GGCGGGAGGG CCGCGTGAAC
GGGCGGGCCC GGCGAGCACA CGGAGGGACG GCGTGA
 
Protein sequence
MTSPGWRPDR NPGGYRLNVD DLNLDGSLLL RRWSRGQLIA LDALAGAAYT ITLLTFAAAR 
PATETPLWAQ SLLVAVTGSA LALRRRWPLP VFVLALGTSL ASMFLGLVHD GFAAAAFALY
LVALTRPRPR WEPTVTIGVG SAAAVVMLSV AGSPDPGWWL RLLGVLLPCV ALLGGTWTVG
RAVRERRAYA ARAAEQLADR AVTEERLRIA RELHDVVAHS MSLIAVKAGI ANHVAEARPE
EARDALRVIE ATSRGALTEM RHLLGVMRSG TAPDPGSGLS PAPGLAGLPG LADRAALAGV
RVELDVTAAA LPEGRRAVGL PDRAGGPDQR GQARRAGALP GGGRGGRAGG TGRGDRRRSG
PPGPAGPARS RAGRNAGEGP HVRRVLHGRA TAGGRVRGVG TAALRREHAV RRARREGRVN
GRARRAHGGT A