| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5610 |
|---|
| Symbol | |
|---|
| ID | 8668904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6144671 |
|---|
| End bp | 6146077 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003341105 |
|---|
| Protein GI | 271966909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.461121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.257842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGA GCCACTTGAT TGATGAGTGG CAAAGTATCG GCGCCATAGT GGTCCACGCA
AGGGCATATC GGATCACGCG ACGACATAAT GGCCGGGTGG GAAGTGAAGA TCTGGACCAG
TTCGCCGCCC TCGTGCGTGA CCGGCTGCGG CTGCGCCAGG GGAGGGAGCC GGCCGGTCGC
AGGCTCGCCG GAGCGCTGAC CGACCTCGCC GAGATCGGCG CGCTGGCCCC CGGCACCAGG
CTGCCGTCCG AACGCGACCT CGCCCAGGCC GTCGGCCTCA GCCGCGGCAC GGTCGCCGCC
GCCTTCAACG CCCTGTGCGA CGAGGGACTC TGCGAGCGCA GGCACGGCAG CGGCACCTAC
CTGCTCCAGG CGCCCTCGTT CACCGGGCTG CTGAACGCGG GCGCGGTGCT CGCCGACCTG
TCCACCTCCG TCGTGCCCGA CCCCTCCCAC CTGGTCCTGC CCCCGCTCGA CCCGGCCGAG
CTCATGCGCA CTCCCAGCGG CCACGGCTAC GACACCAGGG GAGACCCCCG GCTGCGGGCC
ATGCTCGGCG GGGACGTGCT GATCACCGGC GGCGCCCAGC ACGGCATCGA CCTGGCCGTC
AGGGTCCTGC TGCGCCCGGG TGACCGGGTG CTGGTGGACG ACCCGACGTA CGGCGGCGCC
CTCGCGATCC TCCGGCGGGC GGGAGCGCAC GCCGTACCCG TCGACCTGGC CGATCCCGGA
GCGGTCGGCG CGGCGATCGC CCGCCACCGG CCCGCCCTCG TCTACGTCGT CAGCGTCGGC
AACCCCACCG GCGCCGTCCC CGACCTGCGG CACGTCGCGG AGCTCGCCCG GGCGCAGGAC
GTGACGATCG TCGAGGACAG GACCCTCGCC GAGCTCGTCC ACGAGGGCGA GCCCCCGGCC
CCGCTCGCGA CGGTTCACCC GTATGGCACG GTCACCGTGA ACTCGCTGTC CAAGGTGCTC
TGGGGCGGGC TGCGGCTGGG CTGGCTGGAG GCCGCCGAGC CGCTGCTGGC CCGCCTGACC
GAGGCCAAGC AGGGGTCCGA CCTGGCCACG AGCGCCGTCT CCCAGCGTCT GGCGGCCGAA
CTGCTCGAAC GCAACCCCGT CGCCTCCTGG CGTGCGGAGC TGGCCCGCCG CCGCGACCAC
TTCGCCGCCG CACTCACCGC CCGGCTCCCC GGGTGGACCT GGACGCGGCC CCAGGGCGGC
CTGTCCCTGT GGACCCGCCT CCCCGGCGTC GACACCGACC GCTTCGCCGC GCTCACCCGC
CGGTACGGCG TCGCCGTCGC GCCCGGCTCG CTGTTCTCCG CAGACGGCCG CCACCGCGAC
CGCCTGCGCC TCAGCTTCGC CCTCCCGCCC GAGCTGCTCG ACCAGGCCGT CACCGGTCTC
GCCCGCGCCT GGGAGGAGCG CGACTGA
|
|---|
| Protein sequence | MNMSHLIDEW QSIGAIVVHA RAYRITRRHN GRVGSEDLDQ FAALVRDRLR LRQGREPAGR
RLAGALTDLA EIGALAPGTR LPSERDLAQA VGLSRGTVAA AFNALCDEGL CERRHGSGTY
LLQAPSFTGL LNAGAVLADL STSVVPDPSH LVLPPLDPAE LMRTPSGHGY DTRGDPRLRA
MLGGDVLITG GAQHGIDLAV RVLLRPGDRV LVDDPTYGGA LAILRRAGAH AVPVDLADPG
AVGAAIARHR PALVYVVSVG NPTGAVPDLR HVAELARAQD VTIVEDRTLA ELVHEGEPPA
PLATVHPYGT VTVNSLSKVL WGGLRLGWLE AAEPLLARLT EAKQGSDLAT SAVSQRLAAE
LLERNPVASW RAELARRRDH FAAALTARLP GWTWTRPQGG LSLWTRLPGV DTDRFAALTR
RYGVAVAPGS LFSADGRHRD RLRLSFALPP ELLDQAVTGL ARAWEERD
|
|---|
| |