Gene Sros_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5606 
Symbol 
ID8668900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6139948 
End bp6140517 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341101 
Protein GI271966905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0377477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.125627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCC GTGCCCGTCT GATAGAGGTC GGAGTCGACC TGGTGGCCAG GGAGGGGATG 
CAGTCCCTGA CGCTGCGGGA GATCGCCCGC CGGGCCGGGG TCTCGCACGG GGCTCCGCGC
CATTACTTCC CGACCCACGT GGCCCTGCTG TCGGCCATCG CACGTCAGGG CTTCGCCGAC
CTGACCGCCA AGGTCACCGA GACGGCGGGG GAAGGCCGGG CGGACCCCCG GGCCCGGCTC
CTGGCGCTGG GAGGCGTCTA CCTCGACTTC GCACTGACCA ACCCCGGCAT GTTCGAGCTG
ATGTTCCGCC ATGACCTGCT GGAGAGCAAC CACCTCGGCT TGCGGGAGAC GAGCCTGCCG
CTCTTCGACA TCCTTACCGA CCTTGTCACC CGGGCGCGGA CACGGCCCGG CCCCGCGCCA
CAGGTCGTCG CCGGCGCGCT CTGGGCCAAC CTGCACGGCA TCGCCCAGCT GTGGGGATGG
GGCAGCCTCC GGCTCGCCAC GGGAGCCGAC GACGCCGGAC CGCTGCTGCG CGCCGCGCTG
GACGCGCACC TCGGACCGGA GAACCGGTGA
 
Protein sequence
MGVRARLIEV GVDLVAREGM QSLTLREIAR RAGVSHGAPR HYFPTHVALL SAIARQGFAD 
LTAKVTETAG EGRADPRARL LALGGVYLDF ALTNPGMFEL MFRHDLLESN HLGLRETSLP
LFDILTDLVT RARTRPGPAP QVVAGALWAN LHGIAQLWGW GSLRLATGAD DAGPLLRAAL
DAHLGPENR