Gene Sros_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5576 
Symbol 
ID8668870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6098195 
End bp6098959 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter ATP-binding protein 
Protein accessionYP_003341071 
Protein GI271966875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.966789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAC CCAAGGTGAG GATCCGCTCG GTCCGCAAGT GCTTCGGCTC CGTCGAGGTG 
CTCAAGGGCA TCAGCCTGGA CGTCCCCGAA GGCGGCGTGG TCTGCGTCGT CGGCCCGTCC
GGGTCCGGCA AGTCGACGCT GCTGCGCTGT GTCAACCGGC TGGAGACCAT CGACTCCGGC
CGCATCTGGG TGGACGGCGA CCTGATCGGC TACGCCGAGC AGGGCGACCG GATCCACCAC
CTGCGCCCCG CGCAGCTCTG CCGCCAGCGG CAGGACATCG GCATGGTGTT CCAGCGCTTC
CACCTGTTCC CGCACCGCAC GGCGCTGGAG AACGTCATGG AGGGCCCGGT CGTCGTCAAG
GGCGTCGCCA GGGGCCAGGC CAGGAAGAGG GCGCTGGAAC TGCTGGAGCG GGTGGATCTC
GCCGACCGCG CGGACCACTA CCCCGCCCAG CTCTCCGGAG GCCAGCAGCA GCGCGTGGCG
ATCGCCCGCA GCCTGGCCAT GGATCCCAAG CTGATGCTCT TCGACGAGCC GACCAGCGCG
CTCGACCCCG AGCTGGTCCA GGAGGTGCTC TCGGTCATGC GGGACCTGGC CGCCAGCGGC
ATGACGATGA TGGTGGTGAC CCACGAGATG GGGTTCGCCC GCGAGGTCGG CGACAACCTG
ATCTTCATCG ACGGCGGCGT GATCGTCGAG CAGGGACACC CCCGCGACGT GCTCGCCAAC
CCGCGCCACG AACGCTTCCG CGCCTTCCTC GGGCAGGTTC TGTGA
 
Protein sequence
MVEPKVRIRS VRKCFGSVEV LKGISLDVPE GGVVCVVGPS GSGKSTLLRC VNRLETIDSG 
RIWVDGDLIG YAEQGDRIHH LRPAQLCRQR QDIGMVFQRF HLFPHRTALE NVMEGPVVVK
GVARGQARKR ALELLERVDL ADRADHYPAQ LSGGQQQRVA IARSLAMDPK LMLFDEPTSA
LDPELVQEVL SVMRDLAASG MTMMVVTHEM GFAREVGDNL IFIDGGVIVE QGHPRDVLAN
PRHERFRAFL GQVL