Gene Sros_5560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5560 
Symbol 
ID8668854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6081256 
End bp6081999 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003341055 
Protein GI271966859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTGA CGAGATTGGA CATCGACCTC GACAGGTCGA GCCCCGTACC CCTCTACTTC 
CAGGTGGCCG AGCGGATCGC GGAGGCGATC CAGTCCGGCG AACTGCTGCC GGGCGCCCGG
CTCGACAACG AGATCCAGCT CGCCGACCAC CTGGGCCTGT CGCGCCCGAC GGTCCGCCAG
GCCATCCAGT ACCTCGTCGA CAAGGGCCTG GTGGTCCGCA AGCGCGGCGT CGGCACCCAG
GTCGTGCACG GCCAGGTCAA ACGGGCGGTC GAGCTCACCA GCCTCTACGA CGACCTGCGC
AGGGCGGGGC AGGAGCCGGT CACCCGGGTG CTGTCCATCG CCACGGTCGC CGCCGAAGAG
GACGTCGCCG CCGCCCTGGG GGTCGCGCCG GGCGCCTCGG TGCTCCGGCT GGAGCGGCTC
AGATACGCCC TGGGGGAACC TCTGGCCCTG TTGCACAACT GGCTGCCGGC AGGGCCGGCG
CACCTGTCGG CCGAGGCCCT GGAGCAGCGC GGGCTCTACG AGCTGCTCCG CGCGACCGGG
ATCCGCATGC GGGTCGCCAA CCAGCGGATC GGCGCCCGCG CCGCCACTCC CGCGGAGGCC
GGACTGCTGG AGGAGCGCCG CTCCTGTCCC CTGCTCACGA TGGTCCGCAC CACCTATGAC
GACCAGGGCA GGGCCGTGGA ACACGGCTCG CACGTCTACC GCGCCTCCCA CTACTCGCTG
GAGGTCACCC TAGTGGAGCG CTGA
 
Protein sequence
MTVTRLDIDL DRSSPVPLYF QVAERIAEAI QSGELLPGAR LDNEIQLADH LGLSRPTVRQ 
AIQYLVDKGL VVRKRGVGTQ VVHGQVKRAV ELTSLYDDLR RAGQEPVTRV LSIATVAAEE
DVAAALGVAP GASVLRLERL RYALGEPLAL LHNWLPAGPA HLSAEALEQR GLYELLRATG
IRMRVANQRI GARAATPAEA GLLEERRSCP LLTMVRTTYD DQGRAVEHGS HVYRASHYSL
EVTLVER