Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5560 |
Symbol | |
ID | 8668854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6081256 |
End bp | 6081999 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003341055 |
Protein GI | 271966859 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGTGA CGAGATTGGA CATCGACCTC GACAGGTCGA GCCCCGTACC CCTCTACTTC CAGGTGGCCG AGCGGATCGC GGAGGCGATC CAGTCCGGCG AACTGCTGCC GGGCGCCCGG CTCGACAACG AGATCCAGCT CGCCGACCAC CTGGGCCTGT CGCGCCCGAC GGTCCGCCAG GCCATCCAGT ACCTCGTCGA CAAGGGCCTG GTGGTCCGCA AGCGCGGCGT CGGCACCCAG GTCGTGCACG GCCAGGTCAA ACGGGCGGTC GAGCTCACCA GCCTCTACGA CGACCTGCGC AGGGCGGGGC AGGAGCCGGT CACCCGGGTG CTGTCCATCG CCACGGTCGC CGCCGAAGAG GACGTCGCCG CCGCCCTGGG GGTCGCGCCG GGCGCCTCGG TGCTCCGGCT GGAGCGGCTC AGATACGCCC TGGGGGAACC TCTGGCCCTG TTGCACAACT GGCTGCCGGC AGGGCCGGCG CACCTGTCGG CCGAGGCCCT GGAGCAGCGC GGGCTCTACG AGCTGCTCCG CGCGACCGGG ATCCGCATGC GGGTCGCCAA CCAGCGGATC GGCGCCCGCG CCGCCACTCC CGCGGAGGCC GGACTGCTGG AGGAGCGCCG CTCCTGTCCC CTGCTCACGA TGGTCCGCAC CACCTATGAC GACCAGGGCA GGGCCGTGGA ACACGGCTCG CACGTCTACC GCGCCTCCCA CTACTCGCTG GAGGTCACCC TAGTGGAGCG CTGA
|
Protein sequence | MTVTRLDIDL DRSSPVPLYF QVAERIAEAI QSGELLPGAR LDNEIQLADH LGLSRPTVRQ AIQYLVDKGL VVRKRGVGTQ VVHGQVKRAV ELTSLYDDLR RAGQEPVTRV LSIATVAAEE DVAAALGVAP GASVLRLERL RYALGEPLAL LHNWLPAGPA HLSAEALEQR GLYELLRATG IRMRVANQRI GARAATPAEA GLLEERRSCP LLTMVRTTYD DQGRAVEHGS HVYRASHYSL EVTLVER
|
| |