Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5528 |
Symbol | |
ID | 8668822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6046555 |
End bp | 6048012 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC-type sugar transport system periplasmic component-like protein |
Protein accession | YP_003341025 |
Protein GI | 271966829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.217643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.1595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAT CCACTGGTAT GCCGGGAGAG ATGAACCGGC GGCAGCTCCT GCGCCGGATC GGCCTGACCG CCCTGGCCGC AGGTCCGGGC GCGGGCCTGC TCAGCGCCTG CGCGACGGCC GGAAGCGGGA GTGGCGCGGG GTCGGCTCCG GCCGCGGCCA CGCCCGCCGC GACCTCGGCG GCCAACCCGT TCGGCGTCGA CCCCGGGAAG CCGCTCGAGG TGGTGATCTT CAACGGCGGC AACGGCGACG GCTACGCGAC CGGGCTCCAC CAGCCGCTGT ACCGCAAGAC GTATCCGCGG GCGGAGATCA AGCACGTCCC CACGCAGAAG ATCGGCACCC AGCTGCGCCC GCGCTTCGTC AGCGGTGACG TGCCGGACGT GGTGAACAAC TCCGGCCCGG AGGCGCTCGA CATGGCGGCG CTGACCGCGG AGGGTCACCT CGCCGATCTG AGCATGCTCT TCGACGCGCC GTCGGTCGAC GACCCGGGGA AGAAGGTGCG CGACACGCTG GTCGGCGGCG CCCACGAGAA CTCGCTGATC GACGGCGTCC CGCACGTCCT CAACTACACC GTCGCCCACC GTGCCCTGTG GTACAACGCC AAGCTCTTCG CGGACAAGGG CTGGACGGTG CCCAGGACCT GGGACGCCTT CCTCGCACTC GGCGAGGAGA CACGGAGGGC GGGCATCACG CTGTTCGCCT ACCCCGGCCA GGTCGGGCCG TTCTACCAGG TCTGGAACCT CGTCTACACC GCGGCGAAGA TCGGCGGCAA CCAGGTCGTC ATCGACATCG ACAACCTGGC GGACGGCGCC TGGACCAGCC CCGCCGTCCT GGCCTCCGTG ACCGCGTGGG CGGACCTGCA GGCCAGGTAC GGCGACAAGT CCTACTTCGG CCTGGACCAC ACCCAGACGC AGGTCAAACA TCTGCAGGAC AAGGTGGCCT TCTACCCCTG TGGCTCCTGG CTGGACAACG AGATGGCCAA GGACAAGCCC GACTCCTTCG AATACGCCAT CGCCCCGGTG CCGAGCGTGA CCGCCACGGA CAAGATGCCC GCGGAGGCCA TCATGGTGGG GGTGAGCGAG GCGTTCTTCG TCTCGGCCAA GGGCGGCAAC CTCGCGGGCG GCCTGGAGTA CCTGCGGATC ATGCTCTCCA GGGAGGGGGC TCGCGGATAC ACCGAGAGAA CCAAGAACCT CACCGTGGTC AACGGCGTCG CCGAGGGCCT CGACCTCCCT CCCGCCGTAC GGAGCGCCGC CAGGGCTCAG GACGCGGCGG GCAGGAACAC CATCACCGAC GCGCGGTTCG AGAGCTGGTA CAAGGAGCTG TTCGACTACT CCCAGACCCA GACGAACGCG GTCATGGCAG GCCGGGCGAC GCCCGAGCAG TTCTGCGCGA ACATGCAGAA GAAGGCCGAC GAGATCAAGA AGGACCCGTC GGTCACCAAG CAGACTCGGA GCGTCTAG
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Protein sequence | MSQSTGMPGE MNRRQLLRRI GLTALAAGPG AGLLSACATA GSGSGAGSAP AAATPAATSA ANPFGVDPGK PLEVVIFNGG NGDGYATGLH QPLYRKTYPR AEIKHVPTQK IGTQLRPRFV SGDVPDVVNN SGPEALDMAA LTAEGHLADL SMLFDAPSVD DPGKKVRDTL VGGAHENSLI DGVPHVLNYT VAHRALWYNA KLFADKGWTV PRTWDAFLAL GEETRRAGIT LFAYPGQVGP FYQVWNLVYT AAKIGGNQVV IDIDNLADGA WTSPAVLASV TAWADLQARY GDKSYFGLDH TQTQVKHLQD KVAFYPCGSW LDNEMAKDKP DSFEYAIAPV PSVTATDKMP AEAIMVGVSE AFFVSAKGGN LAGGLEYLRI MLSREGARGY TERTKNLTVV NGVAEGLDLP PAVRSAARAQ DAAGRNTITD ARFESWYKEL FDYSQTQTNA VMAGRATPEQ FCANMQKKAD EIKKDPSVTK QTRSV
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