Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5480 |
Symbol | |
ID | 8668774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6000223 |
End bp | 6001017 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340980 |
Protein GI | 271966784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0124495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00330894 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGGCGGC TCGTCAAGGC GGAGTTCCGC AGGCTGTTCA CGACGGCGCT GTGGAAGTGG GGGCCGCTCG CCGCCGTCGT CTGCGGCGGC GTCCTGGTCG GCCTGGCCAC GCTGGTCGGG CCGGAGAACT TCGAACCCGC GATGCCGGGC GTACGGACCG AGGAAGGCGT CCGCACCGTC CTCAGCCTGA CCGGCCTGAC CGTGATCGTC CCTGCGCTGT TCGGGGCGAC CGCCGTGACC TCGGAGTACC GCCACAAGAC GATCACCCTC ACCTTCCTGT TCGCCCCCCG GCGGCAGACC GTGCTGGCCG CGAAACTGCT CACGTACGCG GTCGCGGGAG CGGCCTACGG CCTGGTGGTC ACCGCGTCCG CCGCCGCCGG CCTGTACGGC GGGGCCACGC TGCGAGGAGT GAGCATCGGC GCCGGGCCGG GCACGGTCGC CGAACTCCTG CTCCGCCTGG CCGCCGCCAT GACCGTCTAC ACCATGCTCG GCGTCGGGAT CGGAGCGCTG CTGCGCAACC AGACGGCGGC CCTCGCGGCC CTCGGCCTGT ACCTCTACAT GGTCGAACAC GCGCTGGCGC TGATCCCCGG CGTCAACCTC CTCTATCCCT ACCTGCCGGG CGGAGCCACC GCGGCGCTGA CCAACTTCAA CCTGATCAGC CAGGCGGCGG CGGAGATCTC CGTCTCCTCG GCACAGCTCC TGCCGCCGGC GCTCGGCGCG CTCGTCCTGG CGGCCTACGC CGTCACGGCC ACCGCGCTGG CGATCGGCGT CCCCATGCGC CGCGACGTGA CCTAG
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Protein sequence | MRRLVKAEFR RLFTTALWKW GPLAAVVCGG VLVGLATLVG PENFEPAMPG VRTEEGVRTV LSLTGLTVIV PALFGATAVT SEYRHKTITL TFLFAPRRQT VLAAKLLTYA VAGAAYGLVV TASAAAGLYG GATLRGVSIG AGPGTVAELL LRLAAAMTVY TMLGVGIGAL LRNQTAALAA LGLYLYMVEH ALALIPGVNL LYPYLPGGAT AALTNFNLIS QAAAEISVSS AQLLPPALGA LVLAAYAVTA TALAIGVPMR RDVT
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