Gene Sros_5480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5480 
Symbol 
ID8668774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6000223 
End bp6001017 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340980 
Protein GI271966784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0124495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00330894 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGGCGGC TCGTCAAGGC GGAGTTCCGC AGGCTGTTCA CGACGGCGCT GTGGAAGTGG 
GGGCCGCTCG CCGCCGTCGT CTGCGGCGGC GTCCTGGTCG GCCTGGCCAC GCTGGTCGGG
CCGGAGAACT TCGAACCCGC GATGCCGGGC GTACGGACCG AGGAAGGCGT CCGCACCGTC
CTCAGCCTGA CCGGCCTGAC CGTGATCGTC CCTGCGCTGT TCGGGGCGAC CGCCGTGACC
TCGGAGTACC GCCACAAGAC GATCACCCTC ACCTTCCTGT TCGCCCCCCG GCGGCAGACC
GTGCTGGCCG CGAAACTGCT CACGTACGCG GTCGCGGGAG CGGCCTACGG CCTGGTGGTC
ACCGCGTCCG CCGCCGCCGG CCTGTACGGC GGGGCCACGC TGCGAGGAGT GAGCATCGGC
GCCGGGCCGG GCACGGTCGC CGAACTCCTG CTCCGCCTGG CCGCCGCCAT GACCGTCTAC
ACCATGCTCG GCGTCGGGAT CGGAGCGCTG CTGCGCAACC AGACGGCGGC CCTCGCGGCC
CTCGGCCTGT ACCTCTACAT GGTCGAACAC GCGCTGGCGC TGATCCCCGG CGTCAACCTC
CTCTATCCCT ACCTGCCGGG CGGAGCCACC GCGGCGCTGA CCAACTTCAA CCTGATCAGC
CAGGCGGCGG CGGAGATCTC CGTCTCCTCG GCACAGCTCC TGCCGCCGGC GCTCGGCGCG
CTCGTCCTGG CGGCCTACGC CGTCACGGCC ACCGCGCTGG CGATCGGCGT CCCCATGCGC
CGCGACGTGA CCTAG
 
Protein sequence
MRRLVKAEFR RLFTTALWKW GPLAAVVCGG VLVGLATLVG PENFEPAMPG VRTEEGVRTV 
LSLTGLTVIV PALFGATAVT SEYRHKTITL TFLFAPRRQT VLAAKLLTYA VAGAAYGLVV
TASAAAGLYG GATLRGVSIG AGPGTVAELL LRLAAAMTVY TMLGVGIGAL LRNQTAALAA
LGLYLYMVEH ALALIPGVNL LYPYLPGGAT AALTNFNLIS QAAAEISVSS AQLLPPALGA
LVLAAYAVTA TALAIGVPMR RDVT