Gene Sros_5476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5476 
Symbol 
ID8668770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5995448 
End bp5996287 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340976 
Protein GI271966780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.645752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0121442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGAA GACTGCTCGT CCCGCTGGTC GCACTCGTGC TCGTCCTCGC CGCCGCGCCG 
CACGCGGCCG GCGCCGACAC CGGCTTCCCC TCCGTGGGGA GGAACTGGGG CGCCGCCGGG
CCCTACGCCA CCGCCGTGGA CGTGGGCCCG GTGACCACCC TGTACTACCC GCGCGACATC
GCGCAGAGCC CGCGCCGGCA CCCGGTGATC GTCTGGGGCA ACGGCACGTT CGCCTTCCCC
GTGGTCTACC GCGACCTGCT GCTCCACTGG GCCAGCCACG GCTTCGTCGT GGCGGCGGCG
AACACCCCCC AGTCCAACCT CGGCATCTCG ATGCGGGCCG GGATCGAACT GCTGGCCCAG
CGGAACGCCG ACCCGGGCAG CGTCTTCCAC GGCCGTGTCG ACCTGGACCG CATCGGCGCG
TCCGGCCACT CGCAGGGCGG CGCGGCCGCC ATCGTCGTCG GCGGCGACTC CCGGGTGGAC
ACCGTCGTCC CGATCCAGCC CGGACCGCTG GCCGACGCCG ACGCGGTGCA CGGCCCGATG
TTCATCCTGG CCGGGCAGCG CGACAGCATC GTCTGGCCGG CCCTGGTCAA GGCGTTCTAC
AACGACGCCG ACCACATCCC GGCGATCTAC GGTGAGGTCA GGGGCGCCGA CCACTTCACC
GTCGTGGGCG CCCCCGGTCC CTTCGCCGGC CCGACGACGG CGTGGTTCCG CTTCCAGCTC
ATGGGCGACG AGGAGGCGCG CGGCGAGTTC TCCGGTCCGG GCTGCCGCGT CTGCGCCGAC
ACCCGGACCT GGTCCGATGT CCGCCGCAAC CCCCTGGCGC TGCAGGTGCC AGGTCTCTGA
 
Protein sequence
MLRRLLVPLV ALVLVLAAAP HAAGADTGFP SVGRNWGAAG PYATAVDVGP VTTLYYPRDI 
AQSPRRHPVI VWGNGTFAFP VVYRDLLLHW ASHGFVVAAA NTPQSNLGIS MRAGIELLAQ
RNADPGSVFH GRVDLDRIGA SGHSQGGAAA IVVGGDSRVD TVVPIQPGPL ADADAVHGPM
FILAGQRDSI VWPALVKAFY NDADHIPAIY GEVRGADHFT VVGAPGPFAG PTTAWFRFQL
MGDEEARGEF SGPGCRVCAD TRTWSDVRRN PLALQVPGL