Gene Sros_5450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5450 
Symbol 
ID8668744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5972728 
End bp5973609 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content75% 
IMG OID 
ProductHemK family modification methylase 
Protein accessionYP_003340950 
Protein GI271966754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00679911 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.152663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCT CCCCGTCACC TCTCCCTCGA TCCGCCGCCT CCCCCGAGGC CCTGTCCCGA 
TCCCTCGTCG TCACCGCGCT CCGGGCCGCT GGCTGTGTCT TCGCCGAGGA CGAGGCGCAG
TTGCTCATCT CCACGGCACA GACCCCGGCC GACCTCGCCG CCATGGTGGA CCGGCGGGTC
GCGGGCCTGC CTCTCGAACA CGTCCTCGGC TGGGCGGAGT TCTGCGGCCT GCGGATAACC
GTCGACCCCG GGGTCTTCGT CCCCCGCCGC CGCACCGAGT TCCTCGCCCA CCAGGCCGTC
GCCGTCGCCC GCCAGGCCGC CGATCAGGCC GATCGGGCCG GCCGCGTCCG GCCGCGGACC
GTCGTCGTCG ACCTGTGCTG CGGCTCGGGC GCGGTGGGCG CCACGCTGAT CGCGGCCCTG
GACGGGGTCG AGCTGCACGC CGTCGACATA GACCCCGCCG AGGTGCGGTG CGCCCACCGC
AACGTCGCCG CCGCCGGTGG CCAGGTGTAC GAAGGCGACC TCTACGAGCC GCTCCCCGCC
ACGCTGCGGG GCCGCGTCGA CGTCCTGGTC GCCTGCGCGC CCTACGTACC CACCGAGGCG
ATCGGCCTGC TGCCCCCGGA GGCCCGCATA CACGAGCCGC GGGTGGCGCT GGACGGTGGC
GCGGACGGGC TTGACGTCGT ACGGCGAGTG ATCGCCGAGG CGCCGCTGTG GCTGGCGCCG
GACGGCTCCC TGCTGGTCGA GACGAGCGAG CGCCAGGCGC CGCGGACCGT CGAGGCCGTC
GCCCGCGCCG GACTGATCCC GCGGGTGGCC GGTTCCGACG AGCTGAACGC CACCGTCGTC
ATCGGCACCA GGCCCGCTCT CCCGCGTGGA CCGGGCGGCT GA
 
Protein sequence
MSVSPSPLPR SAASPEALSR SLVVTALRAA GCVFAEDEAQ LLISTAQTPA DLAAMVDRRV 
AGLPLEHVLG WAEFCGLRIT VDPGVFVPRR RTEFLAHQAV AVARQAADQA DRAGRVRPRT
VVVDLCCGSG AVGATLIAAL DGVELHAVDI DPAEVRCAHR NVAAAGGQVY EGDLYEPLPA
TLRGRVDVLV ACAPYVPTEA IGLLPPEARI HEPRVALDGG ADGLDVVRRV IAEAPLWLAP
DGSLLVETSE RQAPRTVEAV ARAGLIPRVA GSDELNATVV IGTRPALPRG PGG