Gene Sros_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5388 
Symbol 
ID8668682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5906118 
End bp5906636 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340893 
Protein GI271966697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.44132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG ACGCCCAGGG CTTCCTGGAG CGGTTCGCCA TGATCATGTC CGAGTCCGGC 
TATCCCCGGA TGGCGGCCAG GGTCTTTGCC GCGCTGCTCG TCTCCGACGA TGGCAGGCTC
ACCGCCGCCG AGCTCGCCGA GCGGCTCCAG GTGGGACCGC CGGCGATCTC CGGCGCGGTG
AAATACCTGA TGCATGTGGG AATGGTGGCC CGCGAGCGCG ATCCGGGAGA ACGGCGTGAC
CGTTACCGCG TCGATCAGGT GGCGTGGTTC ACGGCGGCCA TGTCCAGCGA CGAGATCTTC
CGCCGTTTCG AGGAGGGCGC CCGGGAAGGG CTTGAGGTGT TCGATCAGGA CACACCTGTG
GGAGCCCGCC TGGAGGAGAT CCGGCGTTTC TTCGCCTTTC TGCGCCGAGA GGTCCCCCAG
CTGATGGACA AGTGGCGGGA GCTGGAGTCA CGCGATGTCG CGGCGGCGCA GACCGGCCAG
CCCGGTGGCG CCCAGGGCGA CGGCGACCAC GGTCATTAG
 
Protein sequence
MTPDAQGFLE RFAMIMSESG YPRMAARVFA ALLVSDDGRL TAAELAERLQ VGPPAISGAV 
KYLMHVGMVA RERDPGERRD RYRVDQVAWF TAAMSSDEIF RRFEEGAREG LEVFDQDTPV
GARLEEIRRF FAFLRREVPQ LMDKWRELES RDVAAAQTGQ PGGAQGDGDH GH