| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5342 |
|---|
| Symbol | |
|---|
| ID | 8668636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5855810 |
|---|
| End bp | 5857081 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003340849 |
|---|
| Protein GI | 271966653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.764052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.588325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACCG ACCCGGCAGC GACCGCCGTC GCGGTTGTCG AGATGGCATG TGAGGGACGC
TTCGCCGACA TCGAACGGCT CTTCACGCCC TCGCTGCGAG CGTTGGTCGG CGCCGAGGTG
TTGCAGGCCG CCTGGACAGC CGAGATGGGC AGGCGCGGAC CGGTTGGCAC TGTCGGGGAG
CCGGTGAGCG AGCCGGCCCA GGCGGGGCTG GTCCGTGTGA GTGTCCCGGT GGCCTGCGAG
CACGCGGGAC TCACCGTGGT GGTGGCGGTT GACCACGACG GCATGCTGCA CGATCTGCGG
CTTACCGCTA TCACCGCGCC CTGGACGCCT CCGCCGTACG CCGACCCGGC GAGGTTCGAC
GAGCACGACG TCACGGTCGG CGACGGCCCT CTCGCCGTGG CCGGCACGGT GAGCCTGCCG
CATGGGCCCG GCCCGCGAGC GGGCGTCGTG TTGCTCGGCG GGGGCGGGCC CTTCGACCGC
GACGCCACCA GCGGAGCCAA CAAACCACTC AAGGACCTGG CCTGGGGGTT GGCCGGTCGC
GGTGTCGCGG TGTTGCGGTT CGACAAGGTG ACCCACACCC ACAGCGAACA GGTGGCGAAC
GCAGCCGGCT TCACGATGAC CGACGAGTAC GTGCCGCACG CGGTCGCCGC CGTCCGGCTT
CTCCAGCGGC AGCCGGGCGT GGACCCCGCC CGCGTCTTCG TTCTCGGCCA CAGCATGGGC
GGTAAGGTCG CGCCGCGTGT CGCGGCTGCC GAGGCGTCCG TCGCCGGTTT GGTGATCATG
GCCGGCGATA CGCAGCCGAT GCACCAGGCC GCCATCCGCG TCATCCGTTA CCTCGCCTCG
CTGGATCCCG GACCGGCGAC GGAGGCGGCC GTCGAGGCGT TCACGCGGCA GGCCGCGATG
GTCGCCGGTC CCGACCTGTC ACCGTCGACG CCGACCGAGG CGCTGCTGTT CGGCTGGCCG
GCGGCGTACT GGCTGGATCT GCGCGGCTAC GACCCGGTCG CCACCGCGGC GGCGCTGGAC
AAGCCGATGT TCATCCTCCA GGGCGGCCGC GACTATCAAG TGACGGTGGC CGACGATCTG
TCAGGGTGGA AGGCCGGCCT CGCTCACCGG CCGGATGTCA CGATCCGCGT CTACGACGCC
GACAACCACC TGTTCTTTCC CGGCGCGGGT CCGTCCACGC CCGCGGAGTA CGAACCCCCG
CAACACGTGG ACCCGGCCGT CGTCGCCGAC ATCGCGGAGT GGCTGGCGCC GGAGCACGGG
AAGATCGCTT GA
|
|---|
| Protein sequence | MGTDPAATAV AVVEMACEGR FADIERLFTP SLRALVGAEV LQAAWTAEMG RRGPVGTVGE
PVSEPAQAGL VRVSVPVACE HAGLTVVVAV DHDGMLHDLR LTAITAPWTP PPYADPARFD
EHDVTVGDGP LAVAGTVSLP HGPGPRAGVV LLGGGGPFDR DATSGANKPL KDLAWGLAGR
GVAVLRFDKV THTHSEQVAN AAGFTMTDEY VPHAVAAVRL LQRQPGVDPA RVFVLGHSMG
GKVAPRVAAA EASVAGLVIM AGDTQPMHQA AIRVIRYLAS LDPGPATEAA VEAFTRQAAM
VAGPDLSPST PTEALLFGWP AAYWLDLRGY DPVATAAALD KPMFILQGGR DYQVTVADDL
SGWKAGLAHR PDVTIRVYDA DNHLFFPGAG PSTPAEYEPP QHVDPAVVAD IAEWLAPEHG
KIA
|
|---|
| |