Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5296 |
Symbol | |
ID | 8668590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5811080 |
End bp | 5812237 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340806 |
Protein GI | 271966610 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.713748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTCG GCAGGCGATC CCTGGGGGCG GTTCTCCTCA CTCTCGGACT CGTTACCCTG GTGTTATTCA CCGCCGCACT GGCGATCGGC CCGGCCGGAG AGACGGCCCT GGCCGCCGTC CCGGCGAGGG AGGCCGGGTA CGCGGCCGTT CCGGCAGGGG CGGCCGACGA CACCAGACCA CCGACACGCC CCGCCGGACC GCGGCCCTGC CCGGTACCGC TCGTCCCCAC CCCGACCGGC TACGCCTCCA TCTGCTGGGA CCCCTCGACG GACGACACGG GGGTCGTCGG CTATGACCTG TACCGCCTGG ACGTCGGCGG CTTCGTCTCC GCCGCCACCA CGGCCGGCAC GATCGGCGGC TTCTCGGGCG AGCTGAACCG CCTGTACACG ATGTACGTCG TGGCCAGGGA CGCGGCGGGG AACGTCAGCC CGCCCTCCAC CCTGATCACG GTGCCCGCGA CGCTTGGGAT GACCCCGACC TCCTCGCCGA GCCCTCCGCC GGGCGACCGC GTGCCTCCGT CCAAGCCGAC CGGCCTGCGC GACGCCTGCC TGCAGGACTA CCGGGGCGTC ACGTTCTGCT GGCAGCCGTC GAGCGACAAC GTGGCGGTGA CGGCGTACGA CGTCTACCGC GAGACCGCGA CGACCTACAC CAAGGTCGGC ACGATCCCCC CTTCCGGGTT CCTGAACTTC ACCGAACCCG GCCTGGTCAC CGGGCAGCGC TACAGCTACG TCGTGGTCGC CAGGGACGCG GCTGACAACC TCAGCGCCCC GTCCGACCCG CTGTCCGCCC TCGCCAGGGA AGGTCTCCCC TCCCCGAGCC CGTCGCCGAC ATCGGGCCCG TCGTGCACGG TGTCGTACCG CGCGGCGACG TGGAGTTCGC GCCTGAACGC GGAGATCACC GTGCGCAACA CCGGCACGAC CGCGATCGAC GGCTGGACGC TGACGGTCGA CTACCCGGCG TCGGCCGTAC GCCTCATCTC GGGCTGGTCC GCGGACTGGA CCCAGACCGG CGCGCGGCTC GCCGGCACGA GCAAGCGGTG GAACGAGATC ATCCCCGCCG GCTCGGCGAC CCAGGTCGGG TTCACCGCCT CGTACAGCGG CCCGCTGCCC GCCCCCGTGA GCTTCGGCCT CAACGGAGGG ACCTGCGCCA CCGGCTGA
|
Protein sequence | MQLGRRSLGA VLLTLGLVTL VLFTAALAIG PAGETALAAV PAREAGYAAV PAGAADDTRP PTRPAGPRPC PVPLVPTPTG YASICWDPST DDTGVVGYDL YRLDVGGFVS AATTAGTIGG FSGELNRLYT MYVVARDAAG NVSPPSTLIT VPATLGMTPT SSPSPPPGDR VPPSKPTGLR DACLQDYRGV TFCWQPSSDN VAVTAYDVYR ETATTYTKVG TIPPSGFLNF TEPGLVTGQR YSYVVVARDA ADNLSAPSDP LSALAREGLP SPSPSPTSGP SCTVSYRAAT WSSRLNAEIT VRNTGTTAID GWTLTVDYPA SAVRLISGWS ADWTQTGARL AGTSKRWNEI IPAGSATQVG FTASYSGPLP APVSFGLNGG TCATG
|
| |