Gene Sros_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5296 
Symbol 
ID8668590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5811080 
End bp5812237 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340806 
Protein GI271966610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.713748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG GCAGGCGATC CCTGGGGGCG GTTCTCCTCA CTCTCGGACT CGTTACCCTG 
GTGTTATTCA CCGCCGCACT GGCGATCGGC CCGGCCGGAG AGACGGCCCT GGCCGCCGTC
CCGGCGAGGG AGGCCGGGTA CGCGGCCGTT CCGGCAGGGG CGGCCGACGA CACCAGACCA
CCGACACGCC CCGCCGGACC GCGGCCCTGC CCGGTACCGC TCGTCCCCAC CCCGACCGGC
TACGCCTCCA TCTGCTGGGA CCCCTCGACG GACGACACGG GGGTCGTCGG CTATGACCTG
TACCGCCTGG ACGTCGGCGG CTTCGTCTCC GCCGCCACCA CGGCCGGCAC GATCGGCGGC
TTCTCGGGCG AGCTGAACCG CCTGTACACG ATGTACGTCG TGGCCAGGGA CGCGGCGGGG
AACGTCAGCC CGCCCTCCAC CCTGATCACG GTGCCCGCGA CGCTTGGGAT GACCCCGACC
TCCTCGCCGA GCCCTCCGCC GGGCGACCGC GTGCCTCCGT CCAAGCCGAC CGGCCTGCGC
GACGCCTGCC TGCAGGACTA CCGGGGCGTC ACGTTCTGCT GGCAGCCGTC GAGCGACAAC
GTGGCGGTGA CGGCGTACGA CGTCTACCGC GAGACCGCGA CGACCTACAC CAAGGTCGGC
ACGATCCCCC CTTCCGGGTT CCTGAACTTC ACCGAACCCG GCCTGGTCAC CGGGCAGCGC
TACAGCTACG TCGTGGTCGC CAGGGACGCG GCTGACAACC TCAGCGCCCC GTCCGACCCG
CTGTCCGCCC TCGCCAGGGA AGGTCTCCCC TCCCCGAGCC CGTCGCCGAC ATCGGGCCCG
TCGTGCACGG TGTCGTACCG CGCGGCGACG TGGAGTTCGC GCCTGAACGC GGAGATCACC
GTGCGCAACA CCGGCACGAC CGCGATCGAC GGCTGGACGC TGACGGTCGA CTACCCGGCG
TCGGCCGTAC GCCTCATCTC GGGCTGGTCC GCGGACTGGA CCCAGACCGG CGCGCGGCTC
GCCGGCACGA GCAAGCGGTG GAACGAGATC ATCCCCGCCG GCTCGGCGAC CCAGGTCGGG
TTCACCGCCT CGTACAGCGG CCCGCTGCCC GCCCCCGTGA GCTTCGGCCT CAACGGAGGG
ACCTGCGCCA CCGGCTGA
 
Protein sequence
MQLGRRSLGA VLLTLGLVTL VLFTAALAIG PAGETALAAV PAREAGYAAV PAGAADDTRP 
PTRPAGPRPC PVPLVPTPTG YASICWDPST DDTGVVGYDL YRLDVGGFVS AATTAGTIGG
FSGELNRLYT MYVVARDAAG NVSPPSTLIT VPATLGMTPT SSPSPPPGDR VPPSKPTGLR
DACLQDYRGV TFCWQPSSDN VAVTAYDVYR ETATTYTKVG TIPPSGFLNF TEPGLVTGQR
YSYVVVARDA ADNLSAPSDP LSALAREGLP SPSPSPTSGP SCTVSYRAAT WSSRLNAEIT
VRNTGTTAID GWTLTVDYPA SAVRLISGWS ADWTQTGARL AGTSKRWNEI IPAGSATQVG
FTASYSGPLP APVSFGLNGG TCATG