Gene Sros_5282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5282 
Symbol 
ID8668576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5798989 
End bp5799531 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340794 
Protein GI271966598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.217477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTCC CCAAAGAGCG CTGGGCCGAG CTGGCGCTGC ATCCCGTGCG CATCCGGATC 
CTGGGCGCCA CCGCCGGCGG TCGCCGTACG CCATCCGAAC TGGCCCGCCT GCTGCCCGAC
GTGCCCCAGG CGACGCTGTA CCGGCAGATC GCCACCCTCG CCAAGGGCGG AATGCTGAAC
GTCGTGGAGG AGCGCAGGGT CGGAGGCGCG ACGGAGCGGG TGTACGCGCT GCCGGAGGGC
GGGATGACGC CGACCGCCGA GACGCTGGCC TCGACCTCCC CCGAGGAGCA CGCGCGGTAT
TTCACCGCGT TCGTCTCCAG CCTGCTGTCG GAGTTCTCGC GCTACCTCGC CAGGGAGCAC
ATCGACCTGG TGGCCGACGG CGTCGGCTAC CAGCAGATGG TGCTGCACCT GGACGACGAG
GAGTTCATCC GCTTCGCGCA GGGTTTCGCC GAGCTGGTGC GCCCCCTGCT GGCGAACGAG
CCGGGCGACG ACCGGGTGCC CCGCCTGCTG GCGACGGTCC TTCTTCCCTT GACGAAAGGC
TGA
 
Protein sequence
MTVPKERWAE LALHPVRIRI LGATAGGRRT PSELARLLPD VPQATLYRQI ATLAKGGMLN 
VVEERRVGGA TERVYALPEG GMTPTAETLA STSPEEHARY FTAFVSSLLS EFSRYLAREH
IDLVADGVGY QQMVLHLDDE EFIRFAQGFA ELVRPLLANE PGDDRVPRLL ATVLLPLTKG