Gene Sros_5264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5264 
Symbol 
ID8668558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5779226 
End bp5780707 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content74% 
IMG OID 
ProductBeta-lactamase class C and other penicillin binding protein-like protein 
Protein accessionYP_003340776 
Protein GI271966580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0873115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0797924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG AACGAGTCAA GCGCGAGGTA TTCTCGCTGG TCGGCCCGGA CACCCCCGGC 
CTGGCCGTGG GCGTTTACAC CGGCGGCGCC GCGGTGCTCA CCGCAGCTCA GGGGGCGGCG
TGCGTGGAGT TCGGCGTACC GGTCGACGAG CGCACCCGCT TCGACATCGC CAGCGCGAGC
AAACAGTTCA CGGCGGCGTG CGTGCTCCTG CTGGAGCGCG ATGGGAAGCT GGGGCTCGAC
GACGACGTGC GGGCGCACGT GCCGGAGCTG AGCCTGGAGG TGCCGGTGAC GTTGCGGCAG
TGCCTGCAGC ATACGGGCGG CCTGCCGGAG TGGTACGGGC TGCAGGCGCT GACGGGCGTG
CCGCTGGCGG AGATGACCGA GCGGCGACTG CTGGAGGTGC TCACGGGCAT CCGCCACACG
AGTTTCGCGC CGGGCACGGG CTGGGCCTAC TCCAACACCG GATACGTGCT CGCGGCGGTC
GTGGTGGGCA GGGTGGCGGG TTCGTCGCTG GCGGAGTTCG CGCGGGAGCG GCTCTTCGAG
CCGCTGGGGA TGGCGGAGTC GGTGTTCCGG GACGACGCGT CGGTGCCGCT GGAGAGGCTG
GCGTACGGCT ATGCCAACGC CCAGGGCGAG CCGCGCCGGG CCGACACCCA GGAGAGCGCC
GTCGGTGACG GCGGGCTGGT GACGAGCGTG GCGGAGCTGG CGCCGTGGTT CGGATTCCTG
GCCGACGGGC GGGTGCTCGG CGCCGACCTG CGCGACCGGC TGCTGGAGCG GGCGGTTCTG
GCCGACGGTA CGGTCCGGCC GTACGCGCTG GGGATCTATC ACGGCGAGGA CTGGTTCGGT
CATGCGGGCG GCATGCACGG GTACCGGTCG AACCTGCTTT ATCTGCCCGA TCCGGGGGTC
GGCATCGCGG TGCTGTCCAA CCAGACGGCG ATCGACCCGG TGAGGCTGTC GCACCGGCTG
GCGCGGCTGC TGCTCGGCGG GGAGGAGCCG CCGAGGCCCG AGCCGGGGAC GTCGGCGCCG
CCGGAGCGGC TGCACTGGCA TGATCCGGCC GGGGACGGGA CGCTGACCCT CGAACCCACC
GCCGAGGGCA TCGCGATCCC GGACGTGGGA GTGTTCACCA CCGGCGCCGA CGGGCGCTGG
CACGGGACCG GGGACGCCGA GGGCGCCTGG CTGGAGATCG GCGGTGACCG GCTGCTGCTC
CGCACCGGCC CGCCCTCGCG CCCCCCGGTC GTCTTCCACG CCGCCGAGCC GCCCTCGGAC
GCGCCGATGG CCGACGGCGT CTTCCGCAGC CCGGAGCTCG GCATCGACGC CACCGTGAGC
GACGGCGAGG TGCGCGTCGG CCGCGAGCTG AGGCTGCCCT CGGCTCCGGC CCCGGGCGGA
GCGTGGCAGG CCGGGCCGTT CACGCTCCGC CTCCACGAGG GCGACCTGCT GGTGAGCGGC
GCGGGTCTGC GCCGGATGCG CTTCGAGGGC ACGCACGGCT GA
 
Protein sequence
MDLERVKREV FSLVGPDTPG LAVGVYTGGA AVLTAAQGAA CVEFGVPVDE RTRFDIASAS 
KQFTAACVLL LERDGKLGLD DDVRAHVPEL SLEVPVTLRQ CLQHTGGLPE WYGLQALTGV
PLAEMTERRL LEVLTGIRHT SFAPGTGWAY SNTGYVLAAV VVGRVAGSSL AEFARERLFE
PLGMAESVFR DDASVPLERL AYGYANAQGE PRRADTQESA VGDGGLVTSV AELAPWFGFL
ADGRVLGADL RDRLLERAVL ADGTVRPYAL GIYHGEDWFG HAGGMHGYRS NLLYLPDPGV
GIAVLSNQTA IDPVRLSHRL ARLLLGGEEP PRPEPGTSAP PERLHWHDPA GDGTLTLEPT
AEGIAIPDVG VFTTGADGRW HGTGDAEGAW LEIGGDRLLL RTGPPSRPPV VFHAAEPPSD
APMADGVFRS PELGIDATVS DGEVRVGREL RLPSAPAPGG AWQAGPFTLR LHEGDLLVSG
AGLRRMRFEG THG