Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5259 |
Symbol | |
ID | 8668553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5773710 |
End bp | 5774339 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340771 |
Protein GI | 271966575 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.103171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0778828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGAGA AGACGATCGC GGACTTCTGG TTCGACCCCT CCTGCCCGTA CACCTGGGTC ACCTCCCGGT GGCTGCTGGA GGTGGAGAAG GTCCGGCCCG TCGAGGTGCG CTGGCGGGTG ATGAGCCTGT CGGTGCTCAA CGAGGGCCGC GACGACGATC CCGAAGGCGA TCCCGAGGGT TATCTGTGGG TGCCCGTGCG CGTCTGCGCC GCCGTGCGGC AGGAGTACGG CCAGGAGGCG CTCGGCCGGC TGTACACCGC GATGTGGACC TCCGGGCGCG ATCGCGGCGA CCACGACTGG ATGGGCTCCC TTCATGACGC GCTGGCCGCC GCCGGGCTGC CGCTCGAACT GGCCGAGGCG GGGGCCTCGA CGGCCTACGA CGAGGCGGTG CGCGCCTCGC ACGCCGAGGG CATCGGCCTG ATCGGCGATC ATGTCGGTAC CCCGGTGGTC GCCGTCACCG GCGCCGGCGG CGAGCGCGTG GTGTTCTTCG GCCCGGTCAT CTCCCGGGCT CCCACGGGGG AGCAGGCCGG ACGCCTGTGG GACGGGACGC TGCTGGTGGC CGGCACCCCG GGTTTCCATG AGCTCAAGGG CGCCCCGCAT GAGAAGCCCC GGCTCGGCGA CCCGATGTGA
|
Protein sequence | MTEKTIADFW FDPSCPYTWV TSRWLLEVEK VRPVEVRWRV MSLSVLNEGR DDDPEGDPEG YLWVPVRVCA AVRQEYGQEA LGRLYTAMWT SGRDRGDHDW MGSLHDALAA AGLPLELAEA GASTAYDEAV RASHAEGIGL IGDHVGTPVV AVTGAGGERV VFFGPVISRA PTGEQAGRLW DGTLLVAGTP GFHELKGAPH EKPRLGDPM
|
| |