| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5235 |
|---|
| Symbol | |
|---|
| ID | 8668529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5750982 |
|---|
| End bp | 5751605 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003340747 |
|---|
| Protein GI | 271966551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.16745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACGGG TTGCCGATCA TGATCAGCGT CGCGCCCAGA TCGCGCGGGC GTTCCAGCGG
CTGCTCGCCG CGGAGGGGTT CGCGGGCGTC TCGTTCTCGC GGGTGGCGGC CGAGGCGGGC
ATCTCGGTCG GGCTCATCCA GCACTACTTC ACCGGCAAGG ACGTGCTGCT CCACTTCGCC
TACGAAGACG CCGTGAGCCG TATGAGCGAG CGGGTGCGAG CACGCGTCCG CCACGGCGAG
GCCGCCCGTC TCCCGATGGC GGAGGTGCTG CTCGACGGCC TGGCCGAACT GTTGCCGCTC
GACGAGGAGC GGGACGTCGA GTACCGCGTC CGGCAGGGTC TGCAGGCTCA GGCGCTGCAT
CACCTCGGTC TCGCCGACGT CGCCCGGCAG GCAGGCGGTG ACATCCTCGA ATACGTCACG
ATGGCGGTCC GGACCGGCAT GGAACGCGGT GAGGTCGAGC CCGATGTCGA CGCCGTGCCG
GCCGCCCGCA TGATCCTCGC GACCGTGCAA GGTCTGGCCG ATCAGGTCGC GCTCTCGGGC
GCGGACGCGT TCTCGGCACG TGACGTGCTG CGCCGGGCCG TCGCCACGGT GTTCACCGGG
CGTTGCGGTT CTCCCGATCG CTGA
|
|---|
| Protein sequence | MPRVADHDQR RAQIARAFQR LLAAEGFAGV SFSRVAAEAG ISVGLIQHYF TGKDVLLHFA
YEDAVSRMSE RVRARVRHGE AARLPMAEVL LDGLAELLPL DEERDVEYRV RQGLQAQALH
HLGLADVARQ AGGDILEYVT MAVRTGMERG EVEPDVDAVP AARMILATVQ GLADQVALSG
ADAFSARDVL RRAVATVFTG RCGSPDR
|
|---|
| |