Gene Sros_5227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5227 
Symbol 
ID8668521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5743698 
End bp5744246 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNADP oxidoreductase coenzyme F420-dependent protein 
Protein accessionYP_003340739 
Protein GI271966543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.849812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG CAGTCATAGG CACGGGCAAC ATCGGCCGGA CCCTGGGTGC GGCGCTCGCC 
GCGGCCGGAC ACGACGTCCG CTACGGGTCA CGCACGCCTG AGGAATCGGT GCGCGAGGCC
CTCGACGGAG CCGAAGCGGT GATCGTCGGC ATTCCCGGCC AGTCCGTCGA GGCCTTCGCC
CGCGACCACG CCGACGAGCT CGCGGGCAAG GTCGTCATCG ACACCGCCAA CAAGTTCGGC
GACGGTCCCG CGCACAGCGC CGCCGAGTTC GCCGCCCTGG CGCCCGCCGC CCACTACGCC
CGCGCCTTCA ACGCGCTCGG CTGGGAGAAT TTCGCCGACC CCGTCTTCGA CGGCGTGGTG
GCCGACCTCT TCTACTCCGC CGACGAGACC GACCGCAAAA CCGTCGAACG CCTCATCCGC
GACACGGGCC TCAACCCCGT CTACCTCGGC CCCGGCCAGC ACGACCTGCT CGACCGGCTC
CTCGAGCTCT GGTTCACCCT TGTCAACAGC CAGGGCCGCG GCAGGCATCT GGCTCTCAAG
GTCCTCTGA
 
Protein sequence
MNIAVIGTGN IGRTLGAALA AAGHDVRYGS RTPEESVREA LDGAEAVIVG IPGQSVEAFA 
RDHADELAGK VVIDTANKFG DGPAHSAAEF AALAPAAHYA RAFNALGWEN FADPVFDGVV
ADLFYSADET DRKTVERLIR DTGLNPVYLG PGQHDLLDRL LELWFTLVNS QGRGRHLALK
VL