| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5219 |
|---|
| Symbol | |
|---|
| ID | 8668513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5738161 |
|---|
| End bp | 5739075 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein |
|---|
| Protein accession | YP_003340733 |
|---|
| Protein GI | 271966537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTC CACGCGTCGG CGTCAGCCTG CCGCACGTCG GCCCGTACGC CGGCCCCGAC
GCCGTCGTCG CCGTGGCCCA GGCGACCGAA CGGCTCGGAT TCCACGCCGT GTCCGCCAGC
GAACGGCTGC TGACCCCCGC CGGACCGCAC TGGAGCAACG ACGCGGGCCT GCCGGAGTCT
TATGCCTGGG ACTCGCTGGA AATGCTGACC TGGGCGGCCG CGCACACCCG GCGGATCCGC
GTGTGCACCA GCATCCTGAA CTCGATCTTC CAGTCGCCCG TCATCCTGGC CCGCAGGCTC
GCCACGCTCG ACCAGCTGTC TCGGGGGCGG CTGGACGTCG GCATCGGTCA AGGCGGCGGC
ACCCGGGAAC CGCCGTTCTA CATCCCCGAG GAGTTCATCG CGGCGGGCGT GCCGGCCAGC
CGCAGAGGCG CCGGATTCGT CGAGCACGTG GCCGCGATGC GGGCCTGCTG GGGTCCCGAC
CCGGTCGAGT TCCACGGCGA GCACTACCGG ATTCCGCCGT CCCTGGTCGG CCCGAAGCCG
TGGGGCAGCA CCATTCCCCT GCTCATCGGC GCGACGGCCC GCCGCACCAT CGAACGGGCG
GCCCGCATCG GGGACGGTTT CGTCACCGTC GGGGTCGACT GGGACGACAC CCGTGCACAG
GTCCGCTGGT ACCGAGAGGC CGGCGGCACC GGCACCGTCG TGGTGAACAC GATCCCGGTC
CCTCCCGGCG CCCCGGTTTC TCCCACCGTC TTCACCGACG CCGTGCTGAG CGACCTCGAC
CGCATCGCGG CCGTCGGCGC CGACGAGATG CACATCGCGC TCCATCTTCT GCCCGCCCGC
CCGGAGCAGC AGGTCGAGCT GCTGGAAGCG CTCGCGGCCA AGCTCGGCCT GCCCACGTCC
TCGGCGGCGC CGTAG
|
|---|
| Protein sequence | MDLPRVGVSL PHVGPYAGPD AVVAVAQATE RLGFHAVSAS ERLLTPAGPH WSNDAGLPES
YAWDSLEMLT WAAAHTRRIR VCTSILNSIF QSPVILARRL ATLDQLSRGR LDVGIGQGGG
TREPPFYIPE EFIAAGVPAS RRGAGFVEHV AAMRACWGPD PVEFHGEHYR IPPSLVGPKP
WGSTIPLLIG ATARRTIERA ARIGDGFVTV GVDWDDTRAQ VRWYREAGGT GTVVVNTIPV
PPGAPVSPTV FTDAVLSDLD RIAAVGADEM HIALHLLPAR PEQQVELLEA LAAKLGLPTS
SAAP
|
|---|
| |