Gene Sros_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5204 
Symbol 
ID8668498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5720836 
End bp5722002 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content74% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003340721 
Protein GI271966525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.675914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC CTGCGGAGAA GGGCACGATC CCGCGCCTCG CCCTCGCCGG GATCTTCGGC 
GGGCTCTTCT GCGGTTACCT GGGCCTCACC GCGGCGATCC CGGTGCTGCC GGGCTTCGTC
CGGGACAGCT TCGGCGCCAC CGACGTCGCC GTCGGCATGG TGGTCATGGC GACGGCGCTC
ACGGCGCTGC TCGTACGGCC CGTCTCCGGC CACCTGGCGG ACCGGTACGG CCATCGTCTT
GTCATGCAGC TGGGCGCACT GATCGTCGCC GTGGGCGGCG CGCTCTACTT CCTGCCGCTC
GGCCTGACCG GCCTCATCGG GGTCCGCCTG CTGCTCGGCG TCGGCGAGGC GTCGCTCTTC
ACGGCGGGCG CCGTCTGGGT CGTGTCGCTC GCGCCGCACC ACCGCCGCGG GCAGCTGATC
GGGCTCTACG GCGTCAGCAT GTGGGGCGGG ATCTCGGTGG GAACCTTCCT CGGCGCGACG
CTGCTGCCCC TCGGCTACGG CGCGGTGTGG GGCTTCAGTG TCGCCGCCGC GCTCATCGGG
CTCGCGCTGA TCAGCTTGGC TCCCGTGTCC CCCCGCACCG AGCAGCCGAG CGGGGGGCAC
GCCCTGCTGG TGCGCCCGGC GCTGCTGCCG GGGGCGGCGC TCGCGCTCGC CGCCGCCGGG
TACGCCGGCC TCGCCGCCTT CGTCGTCCTC CACCTCCAGG CCCGTGGCAT CGATTCGGGC
GTCGTCGTGC TCAGCTGCTT CAGCGCCGTC TACGCCGGCA CGCGGCTGTT CATCGGCCAC
CTGCCGGACC GGCTCGGGCC GCGCCGCGTC GCGACCTGGT CCGGTGTCGG CGAGGCCGCC
GGCCTCCTGA TCATCGCCCT GGCCCCGAAC CTGACGGTCG CCGTGATCGG CAGCCTGGTC
ATGGGAGCCG GATTCTCGCT GTTGCACCCG TCCCTCGCCC TGATGGTGAT GAACCTCACC
GAGGCGTCGA AGCAGGGAGC CGCGATCGGC GCCTACACCT CCTTCTGGGA CCTGGGCCTG
AGCGTCTGGG GGCCGGTGAT CGGAGCGGTC GCGACCGGCT TCGGGTACCC CGCCGTGTTC
GTGGCCGGCG CCGTCTGCGC GGCGGCGGCC GTGGCCGTGG CGCTCTGTGT CCGCCAGCCG
GCCACGCGGC CGGCGGTCGT GAGCTGA
 
Protein sequence
MTAPAEKGTI PRLALAGIFG GLFCGYLGLT AAIPVLPGFV RDSFGATDVA VGMVVMATAL 
TALLVRPVSG HLADRYGHRL VMQLGALIVA VGGALYFLPL GLTGLIGVRL LLGVGEASLF
TAGAVWVVSL APHHRRGQLI GLYGVSMWGG ISVGTFLGAT LLPLGYGAVW GFSVAAALIG
LALISLAPVS PRTEQPSGGH ALLVRPALLP GAALALAAAG YAGLAAFVVL HLQARGIDSG
VVVLSCFSAV YAGTRLFIGH LPDRLGPRRV ATWSGVGEAA GLLIIALAPN LTVAVIGSLV
MGAGFSLLHP SLALMVMNLT EASKQGAAIG AYTSFWDLGL SVWGPVIGAV ATGFGYPAVF
VAGAVCAAAA VAVALCVRQP ATRPAVVS