Gene Sros_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5193 
Symbol 
ID8668487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5709431 
End bp5710741 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340711 
Protein GI271966515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.102029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGTA AAAAGCCGCA CCTGGAGCGG GCGGTTGCGT TGGGCGAGGC CAGAAGGCGG 
GCGGCGGTGG CGCTGTCCGT CCTCGGCCTG CGCGCGGAGC TCGTCGACGC CGGCCGCGAC
CGCGATCCGA CCGCCTGGTG GTGCGGGCTG CTCGACGACG CGGATTCGCC GCTCGCGTGC
GGGATGGGGA AGGGGCGCCC GGAGGAGGCC CGGGTGGGCG CGCTGTTCGA GGCCATCGAG
CACTACCTCA CCGGCCCGGC GGGGTTCGAC CCCGCCGTCG TGGAACCGGC CGCGCCTGCC
CGGATCGCCG CAGGACCCCT GCGGGCGGAC GCCTCCGCGC TGTTGCTGGC CCGGATGCCC
GGCCGGCGGA TGGCGTGCCT GCCCTATCGC CGGCTCGGCG GGGGAGGAGG GACGCTGGTG
CCGCTGTTCC TGTCCACCCC CTGGTACGTC GAGACCGGGG CCGCACGGTT GCGTGAGCTG
GTCGGGGACG ACTGCGACTA CGTCCACCTG ATGCGCTACA GCTGCAACAG CGGCTCGGCC
GCCGGAGTGG CCGCCGCCGA GGCGCTGCTC CACGCACTCA ACGAGGTGAT CGAGCGGGAC
GCCCTGTCCC TGCTTCTCGC GCGGGCCTTC CTGGGCCGGG GCGGTTTCCA GCCCAGGCTG
ATCGACCCGG GAACGCTTCC AGCGGGCCTC GCGCGGGCAT ATGCGACCGC AGGGGAGCTG
ACCGGATCGC CGGTGCACCT GCTGGACATC ACCAGTGATG TCGGGGTGCC GACCATGCTG
GCGTACACGG CCCCCACTGT CCGCCATCCG CACCGGCGCG GCGCCGGGAC CTCGCTGAGC
CCGGCCTATG CCGCCTGGCG CGCCCTCACC GAGCTCGTCC AGATCACTCT CGGTGAGAAC
CTGTCGCATT CGGGAGCGCC CGCGCGTGGT GATCTGGCCG GGCTGGCCGC GCACCCCGCA
CTGTACGCGT GCGGCCGGTT CGACCTCGCC GGCCCGCTGC GCCAGGCTCG GATGATCCCC
TTCCGGACCA CCGAGGTGGC CGGGCCTCCC GGCGGCCAAC TGCGGAAAGT CGCCGCGATG
CTGGCCGCCC GGGGCTATCC CGTCTTCCAC CGTACGGTGC GCGCCCTTCC GGCCGGGGTC
ACCGTCGTGC ACGTGGTCGT GCCGGGTCTG GAGCGGTTCA TGCTCGTCAC CGACGGCAAC
CTCGTGCTCC CGGGAGGTAG GGGGCAGGCC GCGGCAGCCA GCTTTTCCGA TTTATCGACC
TTTCATATGG AATCAATATT CCCATCTTGG TGGCGAATGT GCAGACAATA G
 
Protein sequence
MASKKPHLER AVALGEARRR AAVALSVLGL RAELVDAGRD RDPTAWWCGL LDDADSPLAC 
GMGKGRPEEA RVGALFEAIE HYLTGPAGFD PAVVEPAAPA RIAAGPLRAD ASALLLARMP
GRRMACLPYR RLGGGGGTLV PLFLSTPWYV ETGAARLREL VGDDCDYVHL MRYSCNSGSA
AGVAAAEALL HALNEVIERD ALSLLLARAF LGRGGFQPRL IDPGTLPAGL ARAYATAGEL
TGSPVHLLDI TSDVGVPTML AYTAPTVRHP HRRGAGTSLS PAYAAWRALT ELVQITLGEN
LSHSGAPARG DLAGLAAHPA LYACGRFDLA GPLRQARMIP FRTTEVAGPP GGQLRKVAAM
LAARGYPVFH RTVRALPAGV TVVHVVVPGL ERFMLVTDGN LVLPGGRGQA AAASFSDLST
FHMESIFPSW WRMCRQ