Gene Sros_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5173 
Symbol 
ID8668467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5687895 
End bp5688365 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340692 
Protein GI271966496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0013731 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00383993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAC CCACCGCCAG CCCGCGCGAG GTACTCGCGC GTCTCCATCG GGGGATGAGC 
GCGACCACGG ATGCCGACCA CCTCGACGAT GAACTATGGG CCGAGGACGT CGTCGTCGAG
ACACCGTTCG CCCCACCAGG CAGGCCACGC CGCTTCGTCG GACGCGAGCA GTTCCTCACC
TTCGCCCGAG CCGGCCGGGC CGCCCTGCCG GTACGCCTGG AAGTGGGGAA GGTCGTGGTA
CACGAGACCA CCGACCCCGA CATGATCATC ACCGAATACG AGCTGTCCGG GACCGATCCG
GCCACCGGGC AGCGCGCCTC GGCTCCCTTC ATCGGCGTAC TCAAGGTCCG CGACGGCCAG
ATCGCGCACT GGCGCGAGTA CCAGGACATG CTGGCGCTGG CTGCCGCGAC CGGCCAGTTG
CCCGATCTGC TGGCCGGCCT GCAATCCGCC GCGGCCGCAG AAGCGGTATG A
 
Protein sequence
MTAPTASPRE VLARLHRGMS ATTDADHLDD ELWAEDVVVE TPFAPPGRPR RFVGREQFLT 
FARAGRAALP VRLEVGKVVV HETTDPDMII TEYELSGTDP ATGQRASAPF IGVLKVRDGQ
IAHWREYQDM LALAAATGQL PDLLAGLQSA AAAEAV