Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5173 |
Symbol | |
ID | 8668467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5687895 |
End bp | 5688365 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340692 |
Protein GI | 271966496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0013731 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00383993 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCAC CCACCGCCAG CCCGCGCGAG GTACTCGCGC GTCTCCATCG GGGGATGAGC GCGACCACGG ATGCCGACCA CCTCGACGAT GAACTATGGG CCGAGGACGT CGTCGTCGAG ACACCGTTCG CCCCACCAGG CAGGCCACGC CGCTTCGTCG GACGCGAGCA GTTCCTCACC TTCGCCCGAG CCGGCCGGGC CGCCCTGCCG GTACGCCTGG AAGTGGGGAA GGTCGTGGTA CACGAGACCA CCGACCCCGA CATGATCATC ACCGAATACG AGCTGTCCGG GACCGATCCG GCCACCGGGC AGCGCGCCTC GGCTCCCTTC ATCGGCGTAC TCAAGGTCCG CGACGGCCAG ATCGCGCACT GGCGCGAGTA CCAGGACATG CTGGCGCTGG CTGCCGCGAC CGGCCAGTTG CCCGATCTGC TGGCCGGCCT GCAATCCGCC GCGGCCGCAG AAGCGGTATG A
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Protein sequence | MTAPTASPRE VLARLHRGMS ATTDADHLDD ELWAEDVVVE TPFAPPGRPR RFVGREQFLT FARAGRAALP VRLEVGKVVV HETTDPDMII TEYELSGTDP ATGQRASAPF IGVLKVRDGQ IAHWREYQDM LALAAATGQL PDLLAGLQSA AAAEAV
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