Gene Sros_5140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5140 
Symbol 
ID8668434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5650565 
End bp5651896 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340661 
Protein GI271966465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0534861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC AGATGCGGCG GCTGGCCGAG CGAACCCCGC CGCATCGAGA GCGCCACGTC 
GATCTTCTGC GCGCCGTCGC GATCGTGGTG GTCGTCGTCG GCCACTGGCT GGCGATCTAC
GTGACCCACC ACGGCAAGGG GTTCCAGGGC ACGAGCACCC TCCAGGTCGT TCCGTGGACC
CGTCCGCTGA CGTGGCTGTT CCAGGTGATG CCGCTGTTCT TCCTGGTCGG CGGCTTCGCG
AACGCCGCGT CCCTCACCTC CCACCTCGGG CGGGGCGGTA ACGCCACGGG CTGGGTGCTG
GGCCGGGCCG GCCGGCTTCT GCGCCCGACG ACGACGTTGC TGGGCGGGCT GGCGATGGCG
GCCATGACGG CCGGGATCCT GGGCGCCGAT CCCGCTCTGA TCGGCGTGGC GGTCTGGCTG
GCCTCGATCC CGTTGTGGTT TCTGGTCGCC TACATCGCGG TGGTGGTCCT CACCCCGCCG
ATGTACGCCC TGCACCGGCG CGCGGGCCTG GCCGTACCGA TCGTTCTGGC GGTCCTGGTC
GGTGTGGGCG ACCTGGCCCG TCTGGCGCTG GCTGTTCCCT ACGTGGGCAA GGCGAACTTC
CTGCTGGCCT GGCTGGCCGT TCATCAGCTC GGCTTCGCCT GGCAGGACGG GCGCCTGCCC
TCCCGGCGGA GCGTGGCCGC GCCGATGACG GTGGCCGGGT TCACCGCCCT TGTGCTTCTC
ACCGTGGTCG GCCCCTATCC GGTCAGCATG GTCGGGTTCG AGGGCGAGAG AGTGCAGAAC
ACCTCCCCGC CCACGCTCGC CCTGCTGGCT CTGGCCGTCA CGCAGGCGGG AATCGCCCTG
TGGACGCGTG ACCGGGGGAA CCGGTGGATG CGCCGGCTGG GCCCGTGGAC CGTCGTCGTG
GCGGTCAACT CGGTGATCAT GACGCTCTTC CTCTGGCACA TGACCGCCGT CGTGATCGGC
GTCCCCGTGC TCTACGGAAC GGTGATGATG CCTGACGCCA CGCCGGGGTC GGCTCTCTGG
CTGCTCCTGC GCATTCCCTG GCTCGCCTGC CTGGCGCTGA TCCTCGCCCT CCTTGTCGCG
ATTTTCGGGC GTTTCGAGCG GGGCACGGGT CAGCGGGCCG ATCCGGTGGG CGCGGTGAGG
GGCCTGCCGG CCGCCGCGCT GACGGTCGCC GGGGCCGTCG CCGTGCTCGC CGGGATCCTG
AGCCTCGCCC TGGCCGGCTC GGGATACCAC GGACCTGTGG GCCTGCCCGT GGGAGTGCTG
GTCAGTTACT TCGGCGGTGT CGCCGTCCTG GGCTTCGTCC GTTGGCGGTA TTCGCGTCCG
GCGCGGGAGT GA
 
Protein sequence
MTRQMRRLAE RTPPHRERHV DLLRAVAIVV VVVGHWLAIY VTHHGKGFQG TSTLQVVPWT 
RPLTWLFQVM PLFFLVGGFA NAASLTSHLG RGGNATGWVL GRAGRLLRPT TTLLGGLAMA
AMTAGILGAD PALIGVAVWL ASIPLWFLVA YIAVVVLTPP MYALHRRAGL AVPIVLAVLV
GVGDLARLAL AVPYVGKANF LLAWLAVHQL GFAWQDGRLP SRRSVAAPMT VAGFTALVLL
TVVGPYPVSM VGFEGERVQN TSPPTLALLA LAVTQAGIAL WTRDRGNRWM RRLGPWTVVV
AVNSVIMTLF LWHMTAVVIG VPVLYGTVMM PDATPGSALW LLLRIPWLAC LALILALLVA
IFGRFERGTG QRADPVGAVR GLPAAALTVA GAVAVLAGIL SLALAGSGYH GPVGLPVGVL
VSYFGGVAVL GFVRWRYSRP ARE