Gene Sros_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5122 
Symbol 
ID8668416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5636603 
End bp5637439 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340648 
Protein GI271966452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.694443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCTC TGGTGCTGGC TCTGGGCTGC TCGGTGGCTT ATGGATGCGC TGATTTTCTC 
GGCGGGCTGG GTGCCCGGAA GGCTCATGTG CTGCGCACGG TGATGATCGC GGCTCCGGCC
AGTCTCGTGG TCGAGCTGCT GCTGTGGCCG TTGCTGGGCG CCTCCTTCAG CGCCGGGGCC
CTCGGCTGGG GCGCCGCCTC GGGTGTCGCT TCGGCGGCGG CGTTCGTGCT GCTCTACCGG
ACCCTGGCGA TCGGCCCGAT GAACGTCCTG TCCCCGGTCA CCGCGCTGAT CTCGGCCGCG
CTGCCGGTGG GCGTGGGTCT GTTGCAGGGC GAGCATCTGG CCGCCGCCGG GCTGATCGGG
CTGCCGCTCG CGCTGGCGGC CGTGGTGCTG GTCAGCGCTG GACCCGGCGT GCGCTCAGCC
CGGCCTTCGC GTACCGCGCT GCTGCTCGCG TTCGGCGCGG GCGCCGCGAT CGCCCTCCAG
CTCGTCTTCC TGCACCAGGC GCCGTCCGAC AGCGGGGTCG CTCCGCTGAT CGTGGGCCGG
ACGGTCTCCT CGGCCGTCAC CCTGACCGCG GCCGCCCTGA TGTTCCGCAG GCTCGGTCCC
GAACGCCCCG CGTACGCGAT GTCGGCGGCC GCGGGTGCGC TGGACTCGAT GGCGAACCTG
CTGTTCCTGC TCGCCGCCCG GAGCGGCGAC CTGTCCGTCG TCGCGGTGAT CACCGCCCTC
TACCCGGCCG GAACGGTCCT GCTCGCCCGT AGCGTGCTGC ATGAGCGCAT CGGCCGCGGC
CAGCTCGTCG GGCTGGGCAC CGCCGCAGTG GCCGTCAGCC TCCTCGCCCT TTCCTGA
 
Protein sequence
MLALVLALGC SVAYGCADFL GGLGARKAHV LRTVMIAAPA SLVVELLLWP LLGASFSAGA 
LGWGAASGVA SAAAFVLLYR TLAIGPMNVL SPVTALISAA LPVGVGLLQG EHLAAAGLIG
LPLALAAVVL VSAGPGVRSA RPSRTALLLA FGAGAAIALQ LVFLHQAPSD SGVAPLIVGR
TVSSAVTLTA AALMFRRLGP ERPAYAMSAA AGALDSMANL LFLLAARSGD LSVVAVITAL
YPAGTVLLAR SVLHERIGRG QLVGLGTAAV AVSLLALS