| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5120 |
|---|
| Symbol | |
|---|
| ID | 8668414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5634349 |
|---|
| End bp | 5635821 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | WD40 repeat-domain-containing protein-like protein |
|---|
| Protein accession | YP_003340646 |
|---|
| Protein GI | 271966450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.413243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGAT ACGTGTTCAT CAGCTACAGC CGCCGAGACC ACAGATATGT GGAAAGACTC
GCCTCGCACC TGAACCATGC GGGCGTGCGG ACCTGGTTCG ATGACGAGAT CCCCATCGGC
GACCGTTTCG AGAAGGTCAT CCGCTCGAAG ATCGACGCAT GTGCCGCCTT CGTGGTCGTG
ATGACCCCGG ACGCCGAGGA GTCCAGATGG GTACATCGAG AGATCACTCG CGCGGAGGAC
AAAGGCAAGG AAATACTGCC GCTTCTGCTG GCGGGTGATG TCTTCTTCCG TATCAATGAC
GCCAATTGCG AGGCCGTGAC GGATGCGCGG ATGCCCACAG CGAAGTTCGT CGACCAGCTG
AAGGCCCTGG TACCGGCGGG TGATTCCACG CCGGGCCTCG TGGAATCACC CGCCCCCGGG
AAAACCTGGA GGCGGTCGAT CTGGTCCTCA CCACTCCTGG CCATACCTCT GGGCATCATC
GCTGTGGCCG CTCTCGCGAT CCCGCTCGCT GAAAAGTGGT CCCCCCGCTC ACCGGCCTCC
ACCGCCACTC ACTCACCGAC CACCGCAGCC ACGTCGACTC CGACGGTCCC CGTCGTCAGC
CTCGATCTCG CCACGCTCAA GGTTCTGGAA AAGCACAAGG GAGAGGTGCG GAGCGTGGCC
TTCAACCCCG ACAGCCGCCT CCTCGCCAGC ACGGGCGAGG ATCGGACTGT CAGGCTGTGG
GATGTCATCA GGGCCGAGCA GACGGCCCAG TGGAAGCTGG GCGGAGAGGG ATACCAGGTG
GCCTTCGGCC GGCAAGGCAG CCTGATCGCG GTGGGCAACG CCAACGGCGT CACGCTGTAT
GACGCCCTCA CCCGCAAGAA GCGTCCGGTC GCGGAATTCC CGCAGGACGC TGCCCGTACG
GTCGCGTTCA GCAAGGACGG CAAGACCATA GCGACCGGCG ACGACCTCAA GAAGGTGCGA
TTATGGAACG TCTTCACACA CGGAGAGGTG GTGTTGACCG GCAACCCCGG GCGTATCACC
TCGGTCGCGT TCAGCCCTGA CGGGTCCACT CTCTTGTCCG CCGACGATGA GGGATTTCTC
ATGCGGTGGG ACACCGGTTC CCGTCGACCC ATCGGCGAGA AAATCCAAGC GGACACCTAC
TTGAACGCGG TGGCGTGGTC GCCCGACGGC ACCTTTTTCG TCACCGCGGG TGACCACGTA
CGGCTGTGGA ACGGCGCCAC CATGACCAAG GAACTTCCCG GAACCGTTGT GACGACAGCG
GTGGCCTTCA CCCCCGGGGG CGTTCTCGTG ACGGGAGATG ACACCGGCTC AGTACTCTTC
TGGGATCCGC GAACAGGAAA GACCATCTAC GAGAACTCGG CGGAACACGA CCAGCCCGTC
CTCACGGTCG CCGTCGCGCC CGACAATCGC ACCCTGTCCA CGGCGAGCAC GTATGACACC
ATCCATCTGC GACGCCTGAG GGATTCCTCC TGA
|
|---|
| Protein sequence | MAGYVFISYS RRDHRYVERL ASHLNHAGVR TWFDDEIPIG DRFEKVIRSK IDACAAFVVV
MTPDAEESRW VHREITRAED KGKEILPLLL AGDVFFRIND ANCEAVTDAR MPTAKFVDQL
KALVPAGDST PGLVESPAPG KTWRRSIWSS PLLAIPLGII AVAALAIPLA EKWSPRSPAS
TATHSPTTAA TSTPTVPVVS LDLATLKVLE KHKGEVRSVA FNPDSRLLAS TGEDRTVRLW
DVIRAEQTAQ WKLGGEGYQV AFGRQGSLIA VGNANGVTLY DALTRKKRPV AEFPQDAART
VAFSKDGKTI ATGDDLKKVR LWNVFTHGEV VLTGNPGRIT SVAFSPDGST LLSADDEGFL
MRWDTGSRRP IGEKIQADTY LNAVAWSPDG TFFVTAGDHV RLWNGATMTK ELPGTVVTTA
VAFTPGGVLV TGDDTGSVLF WDPRTGKTIY ENSAEHDQPV LTVAVAPDNR TLSTASTYDT
IHLRRLRDSS
|
|---|
| |