Gene Sros_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5083 
Symbol 
ID8668377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5603639 
End bp5604208 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340615 
Protein GI271966419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.636855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGCT CCACGTCCGA GTCCGGGACC CGTAGCCGCA CCCGCCGCGC GATCCTGGCG 
GCGGCTGCCT CGACGCTCGC CCGCGACCGT AAGGCGACCT TGGCCGACAT AGCCGAGGCC
GCCCAGGTCG GGCGCAGCAC GCTGCACCGC TACTTCGCCG ACAGGAACGA GCTGATGGCG
GCGGCGATCG TCGACTCCTT CCGCGCGGTG GAGGACGCGG TCCGCGAGGC CGCGATCGAC
CAGGGGCCCG CCCTGGAGGC CATGCGCCGC CTGCTCACCG CCATGGTCGA CGTCGGCGAC
CGGCTGGCGT TCCTGTTCGG CGACCCGCGC GTGCTGGAGG AGTTCACCGA CTGCTTCGAG
CCCGACATGT CGGTGCCGAC CACGACCGGC CTGATCAGGC GCGGCCAGGA AGAGGGCGTC
TTCGACCTCA CGTCCAGCCC CGAGTGGATC CAGCGCGTCA TCTGGGCGGT GACCTACACC
GGCTGGGAGG CGGCGGAGAA GGGAGAGCTG CCACGCCACG GCGTCGCCGC CACGGTGATC
CGCACCTTCG AGAACGGAAT GGTGATATGA
 
Protein sequence
MSSSTSESGT RSRTRRAILA AAASTLARDR KATLADIAEA AQVGRSTLHR YFADRNELMA 
AAIVDSFRAV EDAVREAAID QGPALEAMRR LLTAMVDVGD RLAFLFGDPR VLEEFTDCFE
PDMSVPTTTG LIRRGQEEGV FDLTSSPEWI QRVIWAVTYT GWEAAEKGEL PRHGVAATVI
RTFENGMVI