Gene Sros_5054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5054 
Symbol 
ID8668348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5578134 
End bp5578739 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340587 
Protein GI271966391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.613298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA CTGACGAGCT CGGCCGGAGG GACCGCAAGA AGCTCGAGAC CCGTGCGGCG 
CTGGAGCATG CCGCCCTGAC GCTGGTGGCC GAGCGCGGCC TGGCGGGGGT CACGGTGGAG
GACATCGCCG AGGCCGTGGA CGTCTCCTCA CGCACGTTCT TCAACTACTT CCCGTCCAAA
GAGGACGCGC TCATCGGCCC GAGTCCGGCC TCCACAGTCG AACTGCGCGA GAGGCTGGAG
GCGCTGCCCG CGGACGTGCC GGTCCTGGAG GCGCTGCGGC TGATGTCGCG GGTCGAGGCT
GAGCGCGTCC AGGAGCAGCG CGAGCAATGG CTACTGCGGC TGAAGGTGTT CGAGCAGAAC
CCATCGCTGC TCCCACGGCT GGTCACCAGC GGCAGCGAGA CCGAACACGC CGTGACAGCC
GCCGTCGCCC GCCGGGCCGG TATCGAGCTG GGCACGAGCG GCTATCCCGA GCTTGCGACC
GCGGTGGCCA TGGCGGCCTT CCGGGTGGCG ATGATCCGCT GGAGCGCCGC GGACGGCCGC
CCGGAGCTGG CCGACCTGGT CGACGAGGCC TTCGCCCAGC TCGCCGCGGG CCTGCCCAAT
CCGTGA
 
Protein sequence
MDSTDELGRR DRKKLETRAA LEHAALTLVA ERGLAGVTVE DIAEAVDVSS RTFFNYFPSK 
EDALIGPSPA STVELRERLE ALPADVPVLE ALRLMSRVEA ERVQEQREQW LLRLKVFEQN
PSLLPRLVTS GSETEHAVTA AVARRAGIEL GTSGYPELAT AVAMAAFRVA MIRWSAADGR
PELADLVDEA FAQLAAGLPN P