Gene Sros_5024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5024 
Symbol 
ID8668318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5550394 
End bp5550945 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340561 
Protein GI271966365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00878582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0309891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCC GGGCCGGCGG GCCTGAAAAC CCGCCGCTAC TGGTCAACGA ACACGACCGC 
GACACGGCCG TGACGCGCCT GCAGGAGGCA TACGCCGAAG GGCACATCGA ACACGAGGTG
ATGGACCAAC GCCTCCACCA GGTGCTCACC GCCGAGACGC ACAGCGAGCT CGCGCAGGCG
CTGGCCTCTC TTCCGGGCGA GAATGCGGGC ACCATGTCCA CGATCGCCGC CGTCAGCGGA
CGGATCCGGC GGCGCGGCGC ATGGCGGGTC CCGCGGGTCC TCAAGGTCGA ATCCGCACTC
GGACGGGTGC GCCTGGACCT GTCCCGGGCG GTCATCGAGC ACCCGGTCAT CGACATCGAG
GTGCAACTCG GCATCGGCAG GGCCACCATC ACGGTGCCTC GCGACGCGAC CGTCGACCTC
GAGCATCTGC ACACCGGGTG GAAGGACACG CTCTACAAGC CCCGGCGGCG CTCCCACCCC
GGCGGGCCGA CGATCCGCAT ATCCGGGACC ATGGGAATGG GACGGTTGAA GATCCGTCAC
GCGTGGCGTT GA
 
Protein sequence
MNTRAGGPEN PPLLVNEHDR DTAVTRLQEA YAEGHIEHEV MDQRLHQVLT AETHSELAQA 
LASLPGENAG TMSTIAAVSG RIRRRGAWRV PRVLKVESAL GRVRLDLSRA VIEHPVIDIE
VQLGIGRATI TVPRDATVDL EHLHTGWKDT LYKPRRRSHP GGPTIRISGT MGMGRLKIRH
AWR