Gene Sros_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4845 
Symbol 
ID8668139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5367658 
End bp5368350 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340406 
Protein GI271966210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGT GGGACCGGCC GGAGCCGCCG ACTCGCCCCG TGCCGCTCGA CCGGGAGCGA 
ATCGTTGCCG CCGCCATCGC GCTGGCCGAC GAGGGCGGGC TGGAGGCGGT GTCGTTGCGC
AAGGTCGCCG CCCGGCTGGA CGTCGGCCCG ATGCGGCTGT ACGGATACAT CTCCACCAAG
GAGGAGCTGT TCGACCTCAT GGTGGACGAG GTCCACGCCG AGATCCTCCC CGAGGAGCGG
CCCGGCGACT GGCGGGAGGT GCTGCGCATC CGCGCCCACC GCACCAGGCA GGCCACCCTC
CGTCACGAAT GGCTGGCCGA CCTCCTCGGC GGCCGTCCGA CCCTGGGCCC GAACGCCCTC
ACCGTGACTG AGGCCACGCT GGCCGCCTTC GACGGCCTCG CCGACCTCGA CACCGTCATG
CGCGCCGTGG AGACTGTCAG CGCCTACTTC GCCGGCGCGA TCAGGCGCGA GATCGCGAAC
CTGCGGGCCG AGCGCGCCAC GGGCCTGTCC GAGCGCGACT GGCAGCGCGC CTCCGGTCCG
CATGTGAGGA GGATGCTGGC CACGGGCCGC TTCCCGGCGC TGGCCAAGGC CGTGCACGAC
GGCACGGAGG TGGACGCCGA GGTGTCCTTC TCGACCGGCC TGGACTGGGT CCTCGACGCC
GTGGCCGCCA AACTCGCCCG GCCGCCGGCG TGA
 
Protein sequence
MTVWDRPEPP TRPVPLDRER IVAAAIALAD EGGLEAVSLR KVAARLDVGP MRLYGYISTK 
EELFDLMVDE VHAEILPEER PGDWREVLRI RAHRTRQATL RHEWLADLLG GRPTLGPNAL
TVTEATLAAF DGLADLDTVM RAVETVSAYF AGAIRREIAN LRAERATGLS ERDWQRASGP
HVRRMLATGR FPALAKAVHD GTEVDAEVSF STGLDWVLDA VAAKLARPPA