| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4769 |
|---|
| Symbol | |
|---|
| ID | 8668063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5293534 |
|---|
| End bp | 5294850 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_003340344 |
|---|
| Protein GI | 271966148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.182763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACAG CACTCGCCGC CGCCGTGGTG CTGGCCGCGC ATCCACTGGG CAACTTCAGC
ATCAACCACT ACGACGGGCT GACGATCCAC CGCGACAGGA TCGAGCACCT CGCCATCGTG
GACCTCGCCG AGATCCCCAC CCTGCAACAA CCGCCGACCG GCCCCGCGGA CACCCACGCC
TCTCGCGCCT GCGCCGAGTT GCGTGACGCC GTCCGCTCGC AGGCCGGGGG ACGGCCGCTG
ACCTGGCGTG TCACCACCGC CTCTTTCGTC TACCAGCCGG GCGCCGCCGG ACTGCGCACC
AGCAGGCTCA CGTGCCGTCT GACCGCGTCC TTGCGCGTCG ACCGGCCGCT CGCCCTCACC
TTCGCCAACA CCTACCACGG CGACGCCATG GGCTGGCGGG AGATCACGGC CAAGGGGCAC
GGCGTGCGCC TGCGCGACTC CACCGTCCCC GCAGACAGCG TGTCCGGCGA GCTACGCGAC
TACCCCGCCG ACCTGCTCAG CTCACCGCTC GACGTACGCC GGGCGCGCCT GACGGTGGAG
CCGGGCGATG GCGGCTCCAC CGCGCCGGCG GACGTGCCGG GCATGGACGC CGTCACCCGC
CACACTGGCC TGCTGGCCGA CCGGCTCGAC ACTCTGATCG GCGCCGACCG GCTGACCGTG
CCACTCGGGC TGCTGGCCCT GCTCTTGTCG CTGGTGCTGG GGGCCGTGCA CGCGGCGATG
CCCGGCCACG GCAAGACCGT TATGGCCGCC TACCTCGCCG GACGGCGAGG TAGGCTGCGG
GACGCCGTCA CCGTCGCGGC CACGGTCACC ACCACCCACA CGGCGGGCGT GCTGACCCTG
GGGGGGCTGA TCACGGTCGC CAGCGCGATC ACCGGTGAGG TGGTGCTGGG CTGGCTCGGC
GTGGCCAGCG GGCTCCTCAT CGCCGTGATC GGCGCCGGCC TGCTCCGCTC CGCCTTCCGT
AACCGGCCCC ACCACGGACA CGGACACGGA CACGGACACG GGCACGAGAG GTGGTCGGGT
GGGGTCGTGG CGCTGGCGGT AGCCGGTGGG CTGGTGCCCA GCCCGTCCGC CCTGGTGGTC
CTGCTCGGTG CGATGGCACT TGGACGCACC GCGTTCGGTG TCCTGACCGT GGTGTGCTAC
GGACTCGGCA TGGCGATAAC GCTGCTGATC ACGGCGCTCG CCCTGCGCAG GCTGGGCGAC
CTCACCCTGG CAGGGCGGAT GCGGCGGTTG CGCCCGTACA GCGCCGCCAT GACCGCCACG
CTCGTCCTGC TCGTGGGCAT GGGCGTCACG CTGCGCGCAG TGGCCGCCCT CGTATGA
|
|---|
| Protein sequence | MITALAAAVV LAAHPLGNFS INHYDGLTIH RDRIEHLAIV DLAEIPTLQQ PPTGPADTHA
SRACAELRDA VRSQAGGRPL TWRVTTASFV YQPGAAGLRT SRLTCRLTAS LRVDRPLALT
FANTYHGDAM GWREITAKGH GVRLRDSTVP ADSVSGELRD YPADLLSSPL DVRRARLTVE
PGDGGSTAPA DVPGMDAVTR HTGLLADRLD TLIGADRLTV PLGLLALLLS LVLGAVHAAM
PGHGKTVMAA YLAGRRGRLR DAVTVAATVT TTHTAGVLTL GGLITVASAI TGEVVLGWLG
VASGLLIAVI GAGLLRSAFR NRPHHGHGHG HGHGHERWSG GVVALAVAGG LVPSPSALVV
LLGAMALGRT AFGVLTVVCY GLGMAITLLI TALALRRLGD LTLAGRMRRL RPYSAAMTAT
LVLLVGMGVT LRAVAALV
|
|---|
| |