Gene Sros_4747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4747 
Symbol 
ID8668041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5275940 
End bp5276653 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003340328 
Protein GI271966132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.667529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGA TCGAGGTCGA GGACCTCCGC AAGAACTATG GAAACACCCG GGCGGTCGAC 
GGGGTGTCGT TCACGGTGGC GCGGGGAGAG ACGTTCGGAG TCCTGGGCCA TAACGGCGCG
GGCAAGACCA CCACGGTGGA ATGCCTGGTC GGGCTGCGCA AGCCGGACTC GGGGACCATA
CGCGTGCTCG GTGAGAACCC CGCGAGACGC CGCCGCGCCC TCGCCCAGCG CACAGGCGTG
CAGCTCCAAC AGGGTGAGCT GCCCGACCGG CTCAGGGTGG CCGAGGCCAT GCGCCTGTTC
GCGGCGTTCT ACGATCGCCC GGACGACTGG CGGGCGGTGC TGGAGCGCTG GGGGCTCGGC
CCGATCGCGA ACAAGGCGTT CGGTGACCTG TCAGGTGGCC AGCAGCAGCG GCTCAAGCTC
GCGATGGCCC TGGTGGGCGG CCCCGAACTG GTGGTGCTCG ACGAGCTCAC CACAGGCCTC
GACCCCGTCG CCCGCCGCGA GACATGGACG CTCATCGGCG ACCTCAAGGC CTCCGGTACC
ACGGCGGTGC TGGTGAGCCA TTTCATGGAC GAGGCCGAGG AACTGTGCGA CCGGGTCGCC
GTCTTCGGCA ACGGCCGGAT CATCGCGCTC GGCAGCCCTC GCGAGCTGAT CGGCCGGACC
GGGACCGGCT CCCTGGAGGA GGCGTACTTC GCGCTGTCGG GGGAGGGGCG ATGA
 
Protein sequence
MTVIEVEDLR KNYGNTRAVD GVSFTVARGE TFGVLGHNGA GKTTTVECLV GLRKPDSGTI 
RVLGENPARR RRALAQRTGV QLQQGELPDR LRVAEAMRLF AAFYDRPDDW RAVLERWGLG
PIANKAFGDL SGGQQQRLKL AMALVGGPEL VVLDELTTGL DPVARRETWT LIGDLKASGT
TAVLVSHFMD EAEELCDRVA VFGNGRIIAL GSPRELIGRT GTGSLEEAYF ALSGEGR