Gene Sros_4638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4638 
Symbol 
ID8667932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5158345 
End bp5158935 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340238 
Protein GI271966042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.856697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CCCGCTTCGG CCGACTGCCG GTCGGCACAC GAGCCGCCAT CCTCGCCGTC 
GCTCGCGCCC ACTTCGCCCG CGACGGCAAG GACGCCGCGT CGTTCAATCA GATCATCGCC
GAAGCCGGCA TCTCCAAGAC CTCGGCCTAC CACTACTTCG ACGGCAAGGA CGACCTCTTC
GGCGCCGTAG TCGCCGACGC GGCCGACCGG ATGTTCACCG CGCTCGGTCC CTGGATCGAC
GTGGAAACCG AGGATGAACT GTGGGAGCAG GTGACGGCAG GCACCACACG GCTCATGGCG
CACCTGCGCG ACCACCCCGA TGACCGGGCG GTGCTTGCCG GGCGGCCTCA CCCCGGCGGC
GACGGCAGCT CCTGGATCCA CAGGCTCGTC GTGAACGGCC TGCACATCAA CCTGATCGAC
CCCTACCCAA ACGCCGAACT GATCACCGTA GCGACCATCG GTGTCTTCGA CGCCCTCGAC
ACATGGGCAC TCGACCATCC GAGTGAGCTC GGCCACTCCG TCGCGGACAC GCTCACCCTG
TTCCTCACAC GGCTCTGGAA CACCGCCCCC AAGGCGAGGA GTGAGAAATA G
 
Protein sequence
MPLPRFGRLP VGTRAAILAV ARAHFARDGK DAASFNQIIA EAGISKTSAY HYFDGKDDLF 
GAVVADAADR MFTALGPWID VETEDELWEQ VTAGTTRLMA HLRDHPDDRA VLAGRPHPGG
DGSSWIHRLV VNGLHINLID PYPNAELITV ATIGVFDALD TWALDHPSEL GHSVADTLTL
FLTRLWNTAP KARSEK